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Name : shiA (GPOL_c25350) Accession : YP_005282930.1 Strain : Gordonia polyisoprenivorans VH2 Genome accession: NC_016906 Putative virulence/resistance : Unknown Product : shikimate transporter ShiA Function : - COG functional category : - COG ID : - EC number : - Position : 2881409 - 2882785 bp Length : 1377 bp Strand : - Note : - DNA sequence : ATGACGACCGAACACAATGTTTCAGCACCACCGGATACCGGCGAGGAGGTTGAACGTATGACCCCCGCGGCTCGCCGCGC GCTGCTGGGCGCCGCGGCAGGCACGCTGATCGAGTGGTTTGATTACGCACTCTACGGTTCCCTGGCGGCGATCCTCGCGC GCGAACTGTTCTTTCCGGAAGTGTCTCCGGGATTGGGTGTCCTGGCTGCCTTTGGCGCATACGGCGTCGCATTTGTCGTC CGTCCTCTGGGTGGCCTGGTCATCGGCCGGATTGGTGACCGGTATGGCCGCAAGCCCGGCCTGGTACTGAGTCTGACCAT CATGGGTCTCTCGACATTCGCGATTGCGTTTCTGCCCACCTTCGCTGTCGCCGGATACTGGGCTGCGGTGCTCCTTGTTG TGTTGCGCCTGCTCCAGGGGTTCGGTGCGGGTGCCGAGAATGCCGGAGCCCTTGCGTTGGTTGCGGAGTATGCGCCGTTA CGACAACGGGGTTTCTATACGGCGCTGATGCAAAGCGTCGTCCTTGTCGGCGTGCTTCTGGCAACGGTTGCCTTTCTCCT GGTGTCGGCACTTCCGCGTGAGGCACAACTGAGCTGGGGATGGAGAGTTCCCTTTCTCTCGGCTGGACTGATGCTCCTGG TTGCCTTCTATATTCGTTCCCGCCTGGAGGAGTCGCCGGAGTTCGTGGCCGTAGCCGAGAAGACTCGGAACGCCGGTTCG AAGCCGGTGCAACCGATTGCCCTGCTCTTTGGGACCATGAAGGCGCGGCTCGTCGCGATGTTCGTGATCATCAGTGCTTA TAACGTATTTGCCGCGTGTTTGACCTCGTTCGTGTCCAGCTATTTGCGAAATACGGTGGAAGTCTCGGCGATGCAAGCTC TTGGTGCCGTATCGGTTGGCACACTCTTCGGAGCCGTGGCCGCACCGGCCTTCGGCGCCGCATGCGACCGCTACGGCTTC CGGCCCGTGTGGCGAGTCGCTGCGTGGACGACCATTCCCGGCGTTTTCGCGATGTTCTTTGGCCTGAGTACGGGGAACTT CTGGATAGCTGCGCTGAGTATCTCGCTGGCATACGTCATCCCGTACGCAGCAGGTGCGGGGGCATTCCCCGGACTTCTTG CGAATGTGTTTCCCGCGCAGGTCCGCTTCTCCGGGATCGCCACCGTCCGAGAGTTCAGTGCCGCACTGGTCGCGGGAACA TTTCCCTTTATCGCAACGGCTCTCGTGTTGGCTTCCGGCGGTGCACCGTGGCTTGTAGCGGGCTATATCGCGATCTGGTC GGTGTTGGGGCTGTTGGCAATTGGATGGCTCGGTCATCACTCTGAGACACCCGCGACACGCAATCTGATGGTGGACCAGA GCGAACCCACATCATGA Protein sequence : MTTEHNVSAPPDTGEEVERMTPAARRALLGAAAGTLIEWFDYALYGSLAAILARELFFPEVSPGLGVLAAFGAYGVAFVV RPLGGLVIGRIGDRYGRKPGLVLSLTIMGLSTFAIAFLPTFAVAGYWAAVLLVVLRLLQGFGAGAENAGALALVAEYAPL RQRGFYTALMQSVVLVGVLLATVAFLLVSALPREAQLSWGWRVPFLSAGLMLLVAFYIRSRLEESPEFVAVAEKTRNAGS KPVQPIALLFGTMKARLVAMFVIISAYNVFAACLTSFVSSYLRNTVEVSAMQALGAVSVGTLFGAVAAPAFGAACDRYGF RPVWRVAAWTTIPGVFAMFFGLSTGNFWIAALSISLAYVIPYAAGAGAFPGLLANVFPAQVRFSGIATVREFSAALVAGT FPFIATALVLASGGAPWLVAGYIAIWSVLGLLAIGWLGHHSETPATRNLMVDQSEPTS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| DIP2166 | NP_940476.1 | ABC transporter permease | Not tested | Not named | Protein | 8e-36 | 42 |
