Gene Information

Name : RPO_06225 (RPO_06225)
Accession : YP_005288003.1
Strain : Rickettsia rickettsii Arizona
Genome accession: NC_016909
Putative virulence/resistance : Unknown
Product : DNA polymerase III subunit epsilon
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1040055 - 1040744 bp
Length : 690 bp
Strand : +
Note : COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases

DNA sequence :
ATGTCGAGTTTAAGAGAAATAATTTTAGATACCGAGACTACGGGACTTGACCCACAACAAGGTCATCGAATCGTTGAGAT
CGGTGCTATTGAGATGGTAAATAAGGTATTAACAGGCAGGAATTTTCATTTTTATATTAATCCCGAGCGAGATATGCCGT
TTGAGGCTTATAGAATTCATGGCATATCCGGCGAATTTTTAAAAGACAAGCCTCTATTTCATACAATAGCCGATGATTTT
TTAGAGTTTATTTCAGATAGCAAACTGATTATTCATAATGCTCCTTTCGATATTAAATTTCTAAATCATGAATTATCATT
ATTAAAAAGAACCGACATTAAACTCTTGGAACTAGCAAATACTATTGATACTTTAGTAATGGCTAGAAGCATATTTCCAG
GCTCAAAATATAATCTTGATGCATTATGTAAAAGATTTAAAGTTGATAATTCAGGTAGGCAGCTTCACGGAGCTTTGAAA
GATGCCGCATTACTTGCAGAAGTATATGTAGAGTTAATGGGCGGTAGACAATCCGCTTTTAAAATGGTTGATAAATCTGC
CGTAATAAATAATTTAGCAACTAATCAAGTAAATAACAAAACAGAACAAACTACTATTGTTATTAAACCTACAAAAGAAG
AGCTGCAAAAACATAAAGAGTTTCTCAGTAGGATTTTAAAAACTGCTTAG

Protein sequence :
MSSLREIILDTETTGLDPQQGHRIVEIGAIEMVNKVLTGRNFHFYINPERDMPFEAYRIHGISGEFLKDKPLFHTIADDF
LEFISDSKLIIHNAPFDIKFLNHELSLLKRTDIKLLELANTIDTLVMARSIFPGSKYNLDALCKRFKVDNSGRQLHGALK
DAALLAEVYVELMGGRQSAFKMVDKSAVINNLATNQVNNKTEQTTIVIKPTKEELQKHKEFLSRILKTA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dnaQ AAO17223.1 DnaQ Not tested tcd island Protein 1e-46 49