|
Name : RPK_06145 (RPK_06145) Accession : YP_005295805.1 Strain : Rickettsia rickettsii Hlp#2 Genome accession: NC_016915 Putative virulence/resistance : Unknown Product : DNA polymerase III subunit epsilon Function : - COG functional category : - COG ID : - EC number : - Position : 1041539 - 1042228 bp Length : 690 bp Strand : + Note : COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases DNA sequence : ATGTCGAGTTTAAGAGAAATAATTTTAGATACCGAGACTACGGGACTTGACCCACGACAAGGTCATCGAATCGTTGAGAT CGGTGCTATTGAGATGGTAAATAAGGTATTAACAGGCAGGAATTTTCATTTTTATATTAATCCCGAGCGAGATATGCCGT TTGAGGCTTATAGAATTCATGGCATATCCGGCGAATTTTTAAAAGACAAGCCTCTATTTCATACAATAGCCGATGATTTT TTAGAGTTTATTTCAGATAGCAAACTGATTATTCATAATGCTCCTTTCGATATTAAATTTCTAAATCATGAATTATCATT ATTAAAAAGAACCGACATTAAACTCTTGGAACTAGCAAATACTATTGATACTTTAGTAATGGCTAGAAGCATATTTCCAG GCTCAAAATATAATCTTGATGCATTATGTAAAAGATTTAAAGTTGATAATTCAGGTAGGCAGCTTCACGGAGCTTTGAAA GATGCCGCATTACTTGCAGAAGTATATGTAGAGTTAATGGGCGGTAGACAATCCGCTTTTAAAATGGTTGATAAATCTGC CGTAATAAATAATTTAGCAACTAATCAAGTAAATAACAAAACAGAACAAACTACTATTGTTATTAAACCTACAAAAGAAG AGCTGCAAAAACATAAAGAGTTTCTCAGTAGGATTTTAAAAACTGCTTAG Protein sequence : MSSLREIILDTETTGLDPRQGHRIVEIGAIEMVNKVLTGRNFHFYINPERDMPFEAYRIHGISGEFLKDKPLFHTIADDF LEFISDSKLIIHNAPFDIKFLNHELSLLKRTDIKLLELANTIDTLVMARSIFPGSKYNLDALCKRFKVDNSGRQLHGALK DAALLAEVYVELMGGRQSAFKMVDKSAVINNLATNQVNNKTEQTTIVIKPTKEELQKHKEFLSRILKTA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dnaQ | AAO17223.1 | DnaQ | Not tested | tcd island | Protein | 2e-46 | 49 |
