Gene Information

Name : RCA_r05355 (RCA_r05355)
Accession : -
Strain : Rickettsia canadensis CA410
Genome accession: NC_016929
Putative virulence/resistance : Unknown
Product : 16S ribosomal RNA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 384832 - 386339 bp
Length : 1508 bp
Strand : +
Note : -

DNA sequence : 
GACAGAATTAAACTTGAGAGTTTGATCCTGGCTCAGAACGAACGCTATCGGTATGCTTAACACATGCAAGTCGAACGGAC
TAATTAGGGCTTGCTCTAATTAGTTAGTGGCAGACGGGTGAGTAACACGTGGGAATCTGCCCATCAGTACGGAATAACTT
TTAGAAATAAAAGCTAATACCGTATATTCTCTACAGAGGAAAGATATATCGCTGATGGATGAGCCCGCGTCAGATTAGGT
AGTTGGTGAGGTAATGGCTCACCAAGCCAACGATCTGTAGCTGGTCTGAGAGGATGATCAGCCACACTGGGACTGAGACA
CGGCCCAGACTCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGGCGAAAGCCTGATCCAGCAATACCGAGTGAGT
GATGAAGGCCTTAGGGTTGTAAAGCTCTTTTAGCAAGGAAGATAATGACGTTACTTGCAGAAAAAGCCCCGGCTAACTCC
GTGCCAGCAGCCGCGGTAAGACGGAGGGGGCTAGCGTTGTTCGGAATTACTGGGCGTAAAGAGTGCGTAGGCGGTTTAGT
AAGTTGGAAGTGAAAGCCCGGGGCTTAACCTCGGAATTGCTTTCAAAACTACTAATCTAGAGTGTAGTAGGGGATGATGG
AATTCCTAGTGTAGAGGTGAAATTCTTAGATATTAGGAGGAACACCGGTGGCGAAGGCGATCATCTAGGCTATAACTGAC
GCTGATGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAGTGCTAGATATC
GGGAGAATATCTCTCGGTTTCGCAGCTAACGCATTAAGCACTCCGCCTGGGGAGTACGGTCGCAAGATTAAAACTCAAAG
GAATTGACGGGGGCTCGCACAAGCGGTGGAGCATGCGGTTTAATTCGATGTTACGCGAAAAACCTTACCAACCCTTGACA
TGGTGGTCGCGGATTGCAGAGATGCTTTCCTTCAGTTCGGCTGGACCACACACAGGTGTTGCATGGCTGTCGTCAGCTCG
TGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTCATTCTTATTTGCCAGCGGATAATGCCGGGAACTATA
AGAAAACTGCCAGTGATAAGCTGGAGGAAGGTGGGGACGACGTCAAGTCATCATGGCCCTTACGGGTTGGGCTACACGCG
TGCTACAATGGTGTTTACAGAGGGAAGCAAAACGGCGACGTGGAGCAAATCCCTAAAAGACATCTCAGTTCGGATTGTTC
TCTGCAACTCGAGAGCATGAAGTTGGAATCGCTAGTAATCGCGGATCAGCATGCCGCGGTGAATACGTTCTCGGGCCTTG
TACACACTGCCCGTCACGCCATGGGAGTTGGTTTTACCTGAAGGTGGTGAGCTAACGCAAGAGGCAGCCAACCACGGTAA
AATTAGCGACTGGGGTGAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATTACCTCCTTA

Protein sequence : 
-

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
FTT_r07 - 16S ribosomal RNA Not tested FPI DNA e-126 87.3
FTT_r10 - 16S ribosomal RNA Not tested FPI DNA e-126 87.3
FTM_1085 - 16S ribosomal RNA Not tested FPI DNA e-126 87.3
FTM_1695 - 16S ribosomal RNA Not tested FPI DNA e-126 87.3
FTW_2069 - 16S ribosomal RNA Not tested FPI DNA e-126 86.3
FTW_2070 - 16S ribosomal RNA Not tested FPI DNA e-126 86.3