Gene Information

Name : tgt (RCA_04365)
Accession : YP_005299910.1
Strain : Rickettsia canadensis CA410
Genome accession: NC_016929
Putative virulence/resistance : Unknown
Product : queuine tRNA-ribosyltransferase
Function : -
COG functional category : -
COG ID : -
EC number : 2.4.2.29
Position : 950336 - 951421 bp
Length : 1086 bp
Strand : -
Note : COG0343 Queuine/archaeosine tRNA-ribosyltransferase

DNA sequence :
GTGTCAAAATTTTCATTTAATATTCATCAGATGCATAAAAAAGCTAGAAGCGGTGTTATCACAACTGCACACGGTGAAAT
TCGTACCCCTGCTTTTATGCCGGTCGGTACACGAGGCACTATTAAAGCCATGCTGTCTGAATCGGTAGCTGAAACAGGTG
CCGATATACTCCTTGGCAATACTTACCATTTAATGCTGCAACCTGGTAGTGAGCGTATAGCACGCCTTGGCGGTTTGCAT
AAATTTATGAACTGGCATAAACCTATATTAACCGATTCCGGTGGTTTTCAGGTAATGTCGTTATCAAAATTACGCAAGAT
AACCGAAGAGGGAGTAAGTTTTAGCTCCCATATTAACGGTGATAAATATATGCTAACGCCTGAACGTTCTACCGAAATAC
AATATTTACTTGGTAGCACGATCACTATGGCTTTTGATGAATGTACGGCTTATCCTGCAACTTTTGAAGAGGCTAAAACT
TCTGTACAATTAACGACTAGATGGGCAGATAGATCACGAAAGGCTTTTGTTAAGAGGGATGGTTACGCACAATTCGGCAT
TATTCAAGGTAGTGTTTACCAAGAATTACGTGAGCAATCGGCTAAAGACTTAGTAAAGCTTGATTTTGAAGGTTATGCTA
TAGGCGGGCTTGCAGTAGGCGAAGGGCAAGAACTTATGTTTAAAGTGCTTGATTATACTCCTAATTTTCTACCTCAAAAT
AAGCCGTGTTATTTAATGGGAGTAGGTAAACCTGCAGATATTATTGGTGCTGTTAGTAGAGGTATTGACATGTTCGACTG
CGTAATCCCCACTCGTTCAGGTCGTAACGGTCAGGCTTTTACCAAATACGGTACGGTCAATATCCGCAATAGCAAATATG
CTGATGATGACGAGCCACTTGAGTATGATTGTCTATGTCCTGCTTGTAAAAACTATAGTAAAGCTTATCTGCATTACTTA
GTGAGAATCGGTGAAATACTTGGCTCTATGTTAATGACATGGCATAATTTAACATATTTTCAAAATCTCATGAGCCGTAT
TAGAACATATATTAAAGCCGGCCAGGATTTTGATTTTATAACTTAG

Protein sequence :
MSKFSFNIHQMHKKARSGVITTAHGEIRTPAFMPVGTRGTIKAMLSESVAETGADILLGNTYHLMLQPGSERIARLGGLH
KFMNWHKPILTDSGGFQVMSLSKLRKITEEGVSFSSHINGDKYMLTPERSTEIQYLLGSTITMAFDECTAYPATFEEAKT
SVQLTTRWADRSRKAFVKRDGYAQFGIIQGSVYQELREQSAKDLVKLDFEGYAIGGLAVGEGQELMFKVLDYTPNFLPQN
KPCYLMGVGKPADIIGAVSRGIDMFDCVIPTRSGRNGQAFTKYGTVNIRNSKYADDDEPLEYDCLCPACKNYSKAYLHYL
VRIGEILGSMLMTWHNLTYFQNLMSRIRTYIKAGQDFDFIT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tgt AAT96121.1 Tgt Not tested T-PAI Protein 6e-86 52
tgt AAT96069.1 Tgt Not tested T-PAI Protein 5e-86 52
tgt AAT96181.1 Tgt Not tested T-PAI Protein 5e-86 52
tgt AAT96041.1 Tgt Not tested T-PAI Protein 6e-86 52
tgt AAT96105.1 Tgt Not tested T-PAI Protein 6e-86 52