Gene Information

Name : SGRA_3089 (SGRA_3089)
Accession : YP_005323401.1
Strain : Saprospira grandis Lewin
Genome accession: NC_016940
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3187506 - 3188216 bp
Length : 711 bp
Strand : +
Note : COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence :
ATGAAAGAAGAAATCTTCGCCCTTAAACATATCTATAAGCGCTTTCCTTTGGGCGAAGGAGAGTTTACGGCCCTAAAAGA
CTTGAGCCTAAGTATGCAGGCGGCAGAATTTGCGGGCCTAGTCGGTCCCTCGGGCTCAGGTAAAACCACCCTGCTCAATA
TTATTGGTGGCTTGGACCAACCCTCGGAGGGAGAGGCTATTGTTTTGGGCCAAGATGTGGCCAAAATGAGCGCCAAGGCG
GCGGCTAACTTTAGGAACTTAGAGCTGGGGTTTATTTTTCAGCAATTTAACCTTCTGCCCGTCTATACTGTTTTTGAAAA
TGTAGAGTTTCCCTTACTGCTCCAAAAAAAGAGCAAGGCAGAGCGCCAAAAAGCCGTAAAAGAAGCCCTAGAATGGTTGG
GCATTGCGCATTTGGCCAATAAAAAACCCGATAAATTATCGGGCGGAGAGGGCCAAAGAGTGGCCATTGCCCGCGCTATT
GTCAAACGGCCCAAGTTAATCTTGGCCGATGAACCCACCGCCAACCTAGATGCCGCCAATGCACATAATATTATGCGTCT
GATGCGCCGCCTGAATCAAGAATTAGGCACGAGCTTTCTATTTTCTACCCATGATGAGAAAGTAATGGCCTACCTAGAGC
GCATCATCCATCTTCGAGACGGAGAAATCGAAAAGGATGAGGCCAAAACTCCTAAAACAGTAAGCGAATGA

Protein sequence :
MKEEIFALKHIYKRFPLGEGEFTALKDLSLSMQAAEFAGLVGPSGSGKTTLLNIIGGLDQPSEGEAIVLGQDVAKMSAKA
AANFRNLELGFIFQQFNLLPVYTVFENVEFPLLLQKKSKAERQKAVKEALEWLGIAHLANKKPDKLSGGEGQRVAIARAI
VKRPKLILADEPTANLDAANAHNIMRLMRRLNQELGTSFLFSTHDEKVMAYLERIIHLRDGEIEKDEAKTPKTVSE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 4e-31 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SGRA_3089 YP_005323401.1 ABC transporter NC_008702.1.4606598. Protein 3e-31 45
SGRA_3089 YP_005323401.1 ABC transporter NC_012469.1.7686878. Protein 4e-41 43
SGRA_3089 YP_005323401.1 ABC transporter CP001581.1.gene798.p Protein 2e-33 41