Gene Information

Name : O3Y_06730 (O3Y_06730)
Accession : YP_005333212.1
Strain :
Genome accession: NC_016944
Putative virulence/resistance : Virulence
Product : RTX toxin transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1543786 - 1545894 bp
Length : 2109 bp
Strand : -
Note : COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain

DNA sequence :
ATGATATCCAACAATGAAAGACTCACGCTGATATGCATTCATTTTTATTTAAGTATCATCAGCGGTAATCGAGAAAAAAT
AAAAGACGAAAGTCATTTAACTGACACTGAAAACTTCAAAGAAGAACTGGATAAAATACAGAAAGAACACAAAGTCAAAA
TACGCACAAAAATTTCACAATTTAAAAACATCGAATCACTAAAAACACCTGCAATTTTATTTGATCAGCACGACTTACCA
TTTATTACAGCAAAGACTAATAAAGATAAATGTTTAATACAAAGACCTAATAAAGAAACTCCCGAAGTTATCTCTTCTCA
CGAACTTAATTCTACTTGGAATAAAAAATCGTTAGTAATACAGCAAGCACAATCGCGCTTTGATATCACTTGGTTCATTC
CTGAATTCCTCCAGCATAAAAGAGTGCTGAGCGAAATTCTTTTATTTTCGTTCGTGCTGCAAATTCTGGCTCTGATCTCA
CCTCTGTTTTTTCAAGTGGTGATGGATAAAGTGCTGGTCCACCAAGCTTGGTCGACGTTGGATGTACTGGTATTTGGTCT
AGTGATTACAGGGGTGATCGAAGTGGTGTTACGCGGATTGCGCGAATATCAGTATGCCCATACCGCCAACCGAATTGACA
TACAGCTTGGACTCAAACTGGTGCAGCATCTGTTTGGACTGCCGCTCATGTTTTTTAAATCACGCCAAGTCGGCGCGATT
GTCACGCGTGTGCGCGAGCTCGACACCATTCGCGAGTTTTTGACTGGCTCTATGTTTACCTTAACGGTCGAGCTACTGTT
TATGTTCGTCTTTCTTTACGTCATGAGCTTACTTTCTGCTCCGCTCACAGGGCTATTTATCGCTACTGTGCCCTGTTATG
TCCTTCTCGCTTGGTGGCTCACACCAAGAATGCAGGCGGCGATTGAAAAGCAGTTTTCACATGCTGCGGCAAATACCTCA
TTTCTCACTGAAACCGTAGCCGGTAGTGAAACGCTGAAAAGTTTGGCGGTTGAGCCGCGATTTATCCGACGCTGGGATGA
ACAAACCGAAAAAATGGTCACAACGGGTTATGACGTCCAGCAGCTTAATAACCGTTCTAACCATTTAGTGCAGTTGCTGC
AAAAAATCACCAGCGTCGCCATTTTATGGTTGGGGGCGACGGAAGTGCTCTCACTTGAGATGACCATTGGTCAACTGATC
GCTTTCAACATGATGACCAACCACATTGCGCAGCCCTTAGCGCGGATGGTCGAGCTGTGGGGACAATTTATTCAAACTCG
GGTCGCCATCGAGAAGCTCGGCGATATGCTTAACCTACCAGTAGAACAACACACAGGGAGTGACAATGTCACTATAAGCG
GCGCTATTAGTTTCAAAAACATCCTCTTTCGTTATCAACCGGATATTCCTCCTACCATTAATGATTTGTCGCTAGACATC
CGTGCAGGTGAAACATTGGGGGTGGTCGGCACCTCGGGCTCAGGCAAAAGCACCCTCGCCCGTCTGTTGTTGCGACTTTA
TAGCCCTGAGCAAGGCAGTATTACCATTGACGGCATTCCACTCAATCACATCAATGTTCAACAGCTCAGACAGCGAGTGG
GTGTGGTATTGCAAGAGAACTTTTTATTTCACAAAAGCGTGAGTGAAAATATTGCCCAATCTAAGCCTGAGGCAAGTTTG
GAAGAGATCATTGAGGCTGCAAAACTCTCGGGCGCACATGACTTCATCCTCAAACTTCCCATGGGTTACGACACGGTATT
AGCAGAAGGTGGTCAATCGCTTTCAGGTGGTCAACGGCAGCGTCTCGCGATTGCACGCACCCTTTTATCAGATCCGAAAG
TGCTGATTTTGGATGAAGCAACCAGTGCGCTGGATGACGAATCTCAAGCCGTCATTCAAGCCAATATGGCCAGCATTGCC
AGAGGCCGTACGGTGATCACGATTGCTCATCGCTTGTCTACGGTGCGTGATTGCGATCGCATCATAGTGCTTCATCAGGG
CACGATTGTTGAGCAAGGCTCACACCAACAATTACTCGCCTACGGCAAACAATACAAACAGTTATGGCAGCTTCAGCAAG
AGCTCAAACAAGAGGAAGCCTCCGCATGA

Protein sequence :
MISNNERLTLICIHFYLSIISGNREKIKDESHLTDTENFKEELDKIQKEHKVKIRTKISQFKNIESLKTPAILFDQHDLP
FITAKTNKDKCLIQRPNKETPEVISSHELNSTWNKKSLVIQQAQSRFDITWFIPEFLQHKRVLSEILLFSFVLQILALIS
PLFFQVVMDKVLVHQAWSTLDVLVFGLVITGVIEVVLRGLREYQYAHTANRIDIQLGLKLVQHLFGLPLMFFKSRQVGAI
VTRVRELDTIREFLTGSMFTLTVELLFMFVFLYVMSLLSAPLTGLFIATVPCYVLLAWWLTPRMQAAIEKQFSHAAANTS
FLTETVAGSETLKSLAVEPRFIRRWDEQTEKMVTTGYDVQQLNNRSNHLVQLLQKITSVAILWLGATEVLSLEMTIGQLI
AFNMMTNHIAQPLARMVELWGQFIQTRVAIEKLGDMLNLPVEQHTGSDNVTISGAISFKNILFRYQPDIPPTINDLSLDI
RAGETLGVVGTSGSGKSTLARLLLRLYSPEQGSITIDGIPLNHINVQQLRQRVGVVLQENFLFHKSVSENIAQSKPEASL
EEIIEAAKLSGAHDFILKLPMGYDTVLAEGGQSLSGGQRQRLAIARTLLSDPKVLILDEATSALDDESQAVIQANMASIA
RGRTVITIAHRLSTVRDCDRIIVLHQGTIVEQGSHQQLLAYGKQYKQLWQLQQELKQEEASA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hlyB NP_755448.1 hemolysin B Virulence PAI I CFT073 Protein 5e-116 45
hlyB CAD33760.1 hemolysin B Virulence PAI I 536 Protein 3e-116 45
hlyB CAD42038.1 HlyB protein Virulence PAI II 536 Protein 3e-116 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
O3Y_06730 YP_005333212.1 RTX toxin transporter VFG1557 Protein 2e-116 45
O3Y_06730 YP_005333212.1 RTX toxin transporter VFG1501 Protein 2e-116 45
O3Y_06730 YP_005333212.1 RTX toxin transporter VFG0907 Protein 2e-116 45
O3Y_06730 YP_005333212.1 RTX toxin transporter VFG1269 Protein 1e-117 44
O3Y_06730 YP_005333212.1 RTX toxin transporter VFG0841 Protein 2e-110 42