Gene Information

Name : salX (PMCN06_0468)
Accession : YP_005362894.1
Strain : Pasteurella multocida HN06
Genome accession: NC_017027
Putative virulence/resistance : Resistance
Product : lipoprotein ABC superfamily ATP binding cassette transporter, ABC protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 494773 - 495468 bp
Length : 696 bp
Strand : -
Note : -

DNA sequence : 
ATGCCAAATTATGTGATTGAAACACAACATTTATACAAAAGATTCGGTCAAGTGACCGCACTTGAAGACATCAACATTCG
AATTAAAGAAGGCGAATTTGTTGCAATCATGGGTGCCTCAGGTTCAGGTAAAACAACGTTAATGAATATTCTCACTGGTT
TAGACACTGCCAGTGAAGGAAAAGTGATCCTAGACGGTGTCGATGCCGCACAACTTGATGAAATCGGCAGACAACGTTTC
CGGGCGGAGAAGATTGGTCTGGTCTTTCAGCAATTCCACTTAATCCCTTATTTAACTGCCTTGGAAAATGTCATGTTAGC
ACAACATTATCACAGTGTAATTGATGAAGATGCAGCCAAGGCGGTGTTACAACAAGTCGGTCTGGCGCATCGTTTCGACC
ACAGACCAAGCCAACTGTCTGGCGGAGAACAACAACGTGTGTGTATTGCGCGCGCCTTAGTTAATCAGCCGCCGGTGATT
TTTGCCGATGAGCCGACAGGAAACCTAGATGAAAAAAATGAGCAACTGGTGCTCGATTTACTCGTCGCATTAAACCAACA
AGGACGTACAGTCGTGATGGTCACCCATAATCCTGAGCTAAGTAAACTGGCCGACCGCACTATTTTCTTACAGCATGGTA
AATTCCTACGAGAAGCCTCAAATGAAAACAAGCGTATTGTTAACCGCACTTTTTAA

Protein sequence : 
MPNYVIETQHLYKRFGQVTALEDINIRIKEGEFVAIMGASGSGKTTLMNILTGLDTASEGKVILDGVDAAQLDEIGRQRF
RAEKIGLVFQQFHLIPYLTALENVMLAQHYHSVIDEDAAKAVLQQVGLAHRFDHRPSQLSGGEQQRVCIARALVNQPPVI
FADEPTGNLDEKNEQLVLDLLVALNQQGRTVVMVTHNPELSKLADRTIFLQHGKFLREASNENKRIVNRTF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-27 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
salX YP_005362894.1 lipoprotein ABC superfamily ATP binding cassette transporter, ABC protein NC_012469.1.7686878. Protein 1e-40 46
salX YP_005362894.1 lipoprotein ABC superfamily ATP binding cassette transporter, ABC protein NC_012469.1.7685735. Protein 1e-36 45
salX YP_005362894.1 lipoprotein ABC superfamily ATP binding cassette transporter, ABC protein NC_008702.1.4606598. Protein 4e-33 45
salX YP_005362894.1 lipoprotein ABC superfamily ATP binding cassette transporter, ABC protein CP001581.1.gene798.p Protein 7e-30 42