Gene Information

Name : Fraau_1308 (Fraau_1308)
Accession : YP_005377431.1
Strain : Frateuria aurantia DSM 6220
Genome accession: NC_017033
Putative virulence/resistance : Virulence
Product : sigma-70 family RNA polymerase sigma factor
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1418709 - 1419227 bp
Length : 519 bp
Strand : -
Note : PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family

DNA sequence : 
TTGAGCTATTCCCCTACCGAGAGTCTGGATCGCCTGTACAGGCTGCATCATGGCTGGCTGCTGCAATGGATCGGCCGGCG
TACCCGTGATCGTGAATGCGCGGCCGAACTTGCCCAGGACACTTTTCTGCGGCTGCTGAGCAAGCCTGCCGACCTGTCGC
AACTCCGCCAGCAGCGCGCCTATCTGAGCACCATCGCCCATGCGTTGATGGTCAGCCACTGGCGCCGCGCCGATCTGGAA
CGATCCTATCTGCAGGCACTGGCCGCGCAGGAGCCCACCGCGCAGCCTTCGCCCGAGCAGCGACTGGCGGCCTTGCAACT
GCTGCATGCCGTGGCGGAAAAACTCGAAGGGCTGGCCCCACGTCCCCGGCAAGCCTTTTTGCTGGCCAGGCTGTCGGGCC
TTGGCTATGCCGAAATCGGCTGCCGACTGGGTGTATCCGAGCGCATGGTCAAGAAATACATGGCGCAGGCCATGCTGCAT
TGTCTGCGTCTGCGCACGCCCGAGCTGATCAGCGCATGA

Protein sequence : 
MSYSPTESLDRLYRLHHGWLLQWIGRRTRDRECAAELAQDTFLRLLSKPADLSQLRQQRAYLSTIAHALMVSHWRRADLE
RSYLQALAAQEPTAQPSPEQRLAALQLLHAVAEKLEGLAPRPRQAFLLARLSGLGYAEIGCRLGVSERMVKKYMAQAMLH
CLRLRTPELISA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08458.1 FecI Virulence SRL Protein 5e-32 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Fraau_1308 YP_005377431.1 sigma-70 family RNA polymerase sigma factor VFG1049 Protein 2e-32 44