Gene Information

Name : Fraau_1787 (Fraau_1787)
Accession : YP_005377874.1
Strain : Frateuria aurantia DSM 6220
Genome accession: NC_017033
Putative virulence/resistance : Virulence
Product : type VI secretion system lysozyme-like protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1899602 - 1900150 bp
Length : 549 bp
Strand : +
Note : PFAM: Gene 25-like lysozyme; TIGRFAM: type VI secretion system lysozyme-related protein

DNA sequence :

ATGGCGCGATCCTCACCCTTGCATGCACAGCGCAAACCGTCGACGCTCCAGCCCTGTGGGCGCGAATTGCAACCGGTATT
GCTTGAGCGTCTGACGGATGACAGGGTCGATCAGCGACGGGAGCCTGACGGTGCCTTTCTGTTGACCCGGACCATGCTGC
GTGAATCCGTGCTGCGGGATTTGCGGTGGTTGCTGAACACCATCCACATGGAGTCCACTGATGATCTGGCTGCCTTTGGC
CAGGTCCGGCAGTCGGTACTCAATTACGGTATAGGCGCCCTGGCCGGGCAGCTGATTGCCGAACTGGAATGGTCGGACAT
CGAAAGCAGCATCCGGGAGGCGATTGTCCAGTTCGAGCCCAGGATACTGGCAGACAGCCTGCGCGTGCGCTGTCTGGCCG
ACAACCTCAATCATGACCACCACAACATCTTGTCGCTGGAACTCAGCGGCGAGTTATGGTGCATCCCTTATCCCCTGGAA
TTCATTTTCCGTTCTGAAATCGATCTGGAATGCGGTTATATCGTCCTGCGTTCCTTGGGGGCAGAGTGA

Protein sequence :

MARSSPLHAQRKPSTLQPCGRELQPVLLERLTDDRVDQRREPDGAFLLTRTMLRESVLRDLRWLLNTIHMESTDDLAAFG
QVRQSVLNYGIGALAGQLIAELEWSDIESSIREAIVQFEPRILADSLRVRCLADNLNHDHHNILSLELSGELWCIPYPLE
FIFRSEIDLECGYIVLRSLGAE

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
STY0290	NP_454872.1	conserved hypothetical protein	Not tested	SPI-6	Protein	4e-21	42

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
Fraau_1787	YP_005377874.1	type VI secretion system lysozyme-like protein	VFG2073	Protein	8e-21	43