Gene Information

Name : rnhA (MC1_06190)
Accession : YP_005393337.1
Strain : Rickettsia parkeri Portsmouth
Genome accession: NC_017044
Putative virulence/resistance : Unknown
Product : ribonuclease H
Function : -
COG functional category : -
COG ID : -
EC number : 3.1.26.4
Position : 1064282 - 1064749 bp
Length : 468 bp
Strand : -
Note : COG0328 Ribonuclease HI

DNA sequence :
ATGCATATTATGGATTCAAAAGTAGTGATATATACTGATGGTGCATGTGCAGGTAATCCAGGTCCCGGAGGGTGGGGAGC
TTTGCTTCAATTTAATGATACTAGCAAAGAAGTATTTGGGTATGAGTTAGATACGACTAATAATCGTATGGAAATTACGG
CAGCACTTGAAGCCTTGAGGATTTTAAAAAAATCTTGTAATATTGAGATTTATACCGATAGTAAATATTTGCAACAAGGA
ATTACCGCTTGGATTCATAATTGGATAAAAAATAATTGGTGTAAAAGCAACAATGAACCCGTTAAAAATGCTGATTTATG
GCAAAAATTATACGCAGAATTGAGTAAACATACTATTATTTGGAAATGGGTAAAAGGTCATGCAAATAATAGCGGTAATG
TTGCTGCCGATAAACTTGCAGTGCAAGGAAGAGAAACTGCTATAGAAATTTTAAAATGTCGTGGATAG

Protein sequence :
MHIMDSKVVIYTDGACAGNPGPGGWGALLQFNDTSKEVFGYELDTTNNRMEITAALEALRILKKSCNIEIYTDSKYLQQG
ITAWIHNWIKNNWCKSNNEPVKNADLWQKLYAELSKHTIIWKWVKGHANNSGNVAADKLAVQGRETAIEILKCRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rnhA AAO17224.1 RnhA Not tested tcd island Protein 1e-29 47