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Name : iroC (UMN798_3010) Accession : YP_005398144.1 Strain : Salmonella enterica 798 Genome accession: NC_017046 Putative virulence/resistance : Virulence Product : ABC transporter protein Function : - COG functional category : - COG ID : - EC number : - Position : 2938947 - 2942543 bp Length : 3597 bp Strand : + Note : - DNA sequence : GTGTGTTGGGAACGTAAAACACTGAGCATCATTGTCATCGTAGCATCAGTATCGACCATTTTACTGGCTGCGCTGACGCC GCTAATAACGCGTCAGGCCGTCAATGACGCGATAGCAGGCGATACGACCCACCTGCCGTTACTTGCCTGCGGCCTGCTGT TAATTGCCCTTTTTGATTTTATCGGGAATTACGTGCGCCGCGGCTATGCCGGAGAACTCTCGCTGTGGGTTCAGCATACG TTACGTAGCCGTGCGTTCGACAGTATTCAAAAACTGGACGGCGCAGGCCAGGACGCCTTGCGTACCGGGCAGGTCATTTC GCGTACCAACAGCGATCTTCAACAGGTACACACCTTGCTACAAATGTGCCCGGTGCCGCTGGCGGTACTCACTTACTATG TGGCCGGTATCGCGGTGATGCTATGGATGTCGCCATCCATGACGCTTATCGTGATTTGCGTACTGGCCGCCCTTGCCATT ACCGCCCTGCGCGCCCGTCGCCGTGTTTTCGCGCAAACGGGGCTTGCCTCAGACCGGCTGGCGCACATGACGGAACATAT GCGCGAAGTATTGGAACAGATCTCAGTGGTGAAGTCCTGCGTGGCGGAGTTGCGCGAAACGCGTTGGCTCGATGGTCAGT CGCGGCAGATGGTGCGGGTACGCATCGGCGCCGCTATCTCGCAGGCGATGCCGGGCGCAACCATGCTGGCGCTACCGGTG ATAGGGCAAATCGTCCTGCTGTGCTATGGCGGCTGGTCGGTAATGAATGGGCGCATCGATCTGGGAACCTTCGTTGCGTT CGCGAGTTTTCTCGCTATGCTGACCGGCCCTACCCGCGTACTGGCATCGTTTTTGGTTATCGCACAGCGCACACAGGCGT CGGTGGAGCGCGTCTTCGCGCTTATCGACACGCGTTCTCGCATGGAAGACGGTACTGAGTCGGTTGAAGGTCAGATTATC GGGCTGGACGTGGAGAAGATGAGTTTCCACTACGACAACGGTAACCGTATCCTCAATGAGATCTCGTTTTCCATTCACGC CGGTGAAACCGTGGCAGTGGTTGGCGCCTCCGGCTCCGGAAAATCAACATTGCTGATGTTGCTGGCGCGCTTTTACGATC CCACCTCCGGCGGGGTGTGGCTCAACACCACTGCGGGTCAACAGAATATTCGCGACCTGAAACTGACGGCGCTTCGTCGT CGCGTTGGCGTAGTTTTTGAAGACGCGTTTCTGTTTGCCGGTACGGTGGCGGAAAACATCGCCTATGGGCACCCGCAAGC GACTCAGGACGACATTCGACGCGCCGCCGATGCCGCAGGCGCCAGCGGGTTCATCAATGCGCTACCGCAGGGGTTCAACA CCCGACTGGCCGAACGCGGAAGCAACCTCTCCGGCGGCCAACGCCAGCGTATTGCGCTAGCCCGGGCACTGATTACCGCG CCGGAACTGCTGATTCTCGATGACACCACCTCGGCGGTCGATGCCGGTACTGAAGCGGAAATTAACACGGCTCTTGGTCG TTATGCCGATAATGAGCATATGCTGCTGGTGATTGCACGCCGCCGTTCAACACTGCAGTTAGCCGATCGGATCGTCGTGC TGGATAAAGGCCGCGTCGTGGATATCGGTACCCAGGCGGAGCTGGATGCAAGGTGTCCGACGTTTCGCTCGCTGATGAGC GGCGAGGGGGATTTTCTCGCCCTTGCCCCGGCAGAACAACGTACGCTATGGCCAACAACGCAGGCGGTAAAATCCGACGA CGCGCATGAGCGCCAGACACCCGCCGGAAAAGGTTTTGTCGACCGGATGACGCGCGTTCCAGAACGCGCCGTACAGATGG CGCTGGCAGGCCACGGGCGTCAAGTCTCATCGCTGCTGACGCCAGTAGCCTGGATGTTCGTCATCGCCGCCCTGCTTATC GCGCTTGATTCCGCCGCAGGCGTTGGCGTGCTGGTGCTTTTGCAGCGCGGTATTGACTCAGGCGTTGCCGCAGGGGATAT GTCGACTATTGGCATATGCGCCCTGCTCGCGCTGTGCCTGGTGGCGATCGGTTGGTGCTGCTATGCGCTGCAAACGATCT TCGCCGCCCGCGCGGCAGAGTCGGTACAGCATACGGTACGCTTACGCAGCTTCAGCCACCTGCTACGCCTGAGTCTTCCC TGGCACGAGAAGCACATCGACTCGCGTCTTACTCGCATGACCGTCGACGTTGATTCACTCGCCCGATTTCTGCAAAACGG TCTTGCCAGCGCGGCCACCAGCATCGTGACGATGGTCGCTATCGCCGCGGCAATGTTCTGGCTTGACCCCATTCTTGCGT TAACGGCATTAAGCGCCGTGCCTGTAGTGATGCTGGCGACGTGGATTTACCGCCGTTTGAGCTCGCCTGCCTACGCCCAG GCACGGCTGGAAATTGGTAAGGTGAACAGTACGCTTCAGGAAAAGGTCTCCGGTATGCGGGTAGTTCAGTCACACGGCCA ACAACAGCAGGAAGCCGCCAGGCTACGGGCGTTATCAGACAACTTCCGCGCCACCCGCGTGCGGGCGCAAAAATACCTTG CCGTTTATTTTCCGTTCCTGACCTTCTGCACCGAGGCTGCCTATGCCGCCGTGCTTTTAATCGGGGCGAGCCGGGTCGCC GGAGGCGAAATGACGCCCGGGATACTGGCGGCGTTCTTCCTGCTACTGGGACAATTTTATGGCCCGGTACAGCAGTTGTC AGGCATTGTTGATTCCTGGCAGCAGGCGACCGCCAGCGGCAAACATATCAATGCGCTATTGGCGACTGAGGAAACGGAGA ATATTGAACCGTCCTCCATAACACCTGGCACTGGCGCGCTACGTCTGGAGGCATTGACATTCCTCTATCCCGAAAAAACG CAACCTGTGCTTGATAATCTCTCGCTCATTATTCCGCCAGGAACGGTAGTCGCGGTGGTCGGACGTAGCGGCGCTGGCAA ATCGACGCTGATCAAGCTGCTGGCCGGGCTCTACTCTCCCGGTAGCGGACAAATCCGTGTCGGTGAGCGCTTAATTGATG CCGCGTCGCTTAGTGATTATCGTCGCCAGACGGGGCTGGTCACTCAGGATGTCGCATTATTTAGCGGCGATATTGCCGAA AATATCCGCTATCCGCGGCCAGACAGCAGCGACACGGAGGTGGAGAGCGCGGCGCGACGGGCGGGACTCTTTGAAACTGT GCAACATCTGCCGCTGGGGTTTCGTACTCCGGTCAATAACGGCGGCACGGATCTGTCCGCGGGCCAGCGTCAGTTGATTG CCCTCGCCCGCGCCCACCTGGCGCAGGCGCATATTCTGCTGCTCGACGAGGCGACAGCGCGTATCGACCGTAGCGCCGAG GAGCGCTTAATGACCTCGCTGACCAGGGTGACGCATACCGAGAAACGCATCGCGCTTATCGTCGCGCACCGGCTGACCAC CGCTCGCCGCTGCGATGTGATTGTCGTAATCGATAAAGGATGTATCGCTGAATATGGCAGCCATGAGCAGTTGATAGCGG CTCATGGCCTGTATGCTCGTCTGTGGCGGAACAGCATCGGCCAGACACGCGATACGCAAGGAGAGGTCATAGGATAG Protein sequence : MCWERKTLSIIVIVASVSTILLAALTPLITRQAVNDAIAGDTTHLPLLACGLLLIALFDFIGNYVRRGYAGELSLWVQHT LRSRAFDSIQKLDGAGQDALRTGQVISRTNSDLQQVHTLLQMCPVPLAVLTYYVAGIAVMLWMSPSMTLIVICVLAALAI TALRARRRVFAQTGLASDRLAHMTEHMREVLEQISVVKSCVAELRETRWLDGQSRQMVRVRIGAAISQAMPGATMLALPV IGQIVLLCYGGWSVMNGRIDLGTFVAFASFLAMLTGPTRVLASFLVIAQRTQASVERVFALIDTRSRMEDGTESVEGQII GLDVEKMSFHYDNGNRILNEISFSIHAGETVAVVGASGSGKSTLLMLLARFYDPTSGGVWLNTTAGQQNIRDLKLTALRR RVGVVFEDAFLFAGTVAENIAYGHPQATQDDIRRAADAAGASGFINALPQGFNTRLAERGSNLSGGQRQRIALARALITA PELLILDDTTSAVDAGTEAEINTALGRYADNEHMLLVIARRRSTLQLADRIVVLDKGRVVDIGTQAELDARCPTFRSLMS GEGDFLALAPAEQRTLWPTTQAVKSDDAHERQTPAGKGFVDRMTRVPERAVQMALAGHGRQVSSLLTPVAWMFVIAALLI ALDSAAGVGVLVLLQRGIDSGVAAGDMSTIGICALLALCLVAIGWCCYALQTIFAARAAESVQHTVRLRSFSHLLRLSLP WHEKHIDSRLTRMTVDVDSLARFLQNGLASAATSIVTMVAIAAAMFWLDPILALTALSAVPVVMLATWIYRRLSSPAYAQ ARLEIGKVNSTLQEKVSGMRVVQSHGQQQQEAARLRALSDNFRATRVRAQKYLAVYFPFLTFCTEAAYAAVLLIGASRVA GGEMTPGILAAFFLLLGQFYGPVQQLSGIVDSWQQATASGKHINALLATEETENIEPSSITPGTGALRLEALTFLYPEKT QPVLDNLSLIIPPGTVVAVVGRSGAGKSTLIKLLAGLYSPGSGQIRVGERLIDAASLSDYRRQTGLVTQDVALFSGDIAE NIRYPRPDSSDTEVESAARRAGLFETVQHLPLGFRTPVNNGGTDLSAGQRQLIALARAHLAQAHILLLDEATARIDRSAE ERLMTSLTRVTHTEKRIALIVAHRLTTARRCDVIVVIDKGCIAEYGSHEQLIAAHGLYARLWRNSIGQTRDTQGEVIG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| iroC | CAC43427.2 | ABC transport protein | Virulence | PAI III 536 | Protein | 0.0 | 80 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| iroC | YP_005398144.1 | ABC transporter protein | VFG1653 | Protein | 0.0 | 80 |
