|
Name : Q7S_05730 (Q7S_05730) Accession : YP_005400963.1 Strain : Rahnella aquatilis HX2 Genome accession: NC_017047 Putative virulence/resistance : Unknown Product : cytochrome c-type biogenesis protein CcmF Function : - COG functional category : - COG ID : - EC number : - Position : 1229737 - 1231710 bp Length : 1974 bp Strand : + Note : COG1138 Cytochrome c biogenesis factor DNA sequence : ATGATGCCGGAACTGGGAACATTTGCACTCTGTCTGGCATTAGGGCTGGCGGTATTGCTGAGTATTTATCCGCAGTGGGG CGCCGCACGTCAGGATGGCCGGATGATGGCGATGGCGCGCCCGTTGTCTTACGGCATGTTTGCCTGCATCGCGCTGGCGT TCATTATTCTGGTGCATGCGTTTGTGGTGAATGATTTCACCGTCGCCTATGTTGCTAATAATTCCAACACCCACCTGCCG GTGTATTACCGCGTGGCGGCGACGTGGGGAGCGCACGAAGGTTCGCTGCTGCTGTGGGTGTTATTACTCAGTTGCTGGAC GCTTGCCGTGGCGCTGTTTAGCCGCCGTATGCCGCAGGATGCGGTGTCGCGCGTGCTGGCGGTGATGGGCATGATCACCG GCGGTTTCCTGCTGTTTATTCTGCTGACATCCAACCCGTTCATCCGCTCGTTGCCGAATTTCCCGGTGGACGGCAGCGAC CTGAATCCGGTGTTACAGGACATCGGCCTGATATTCCATCCGCCATTGCTGTACATGGGGTATGTCGGTTTCTCTGTGGC CTTTGCTTTCGCGATTGCTTCGCTGATGGCAGGGCGTCTGGATACCGCGTGGGCGCGCTGGTCGCGTCCGTGGACACAAG CCGCCTGGGTGTTTCTGACCATCGGTATCGTGCTCGGATCGGCGTGGGCGTATTACGAATTAGGCTGGGGCGGCTGGTGG TTCTGGGATCCGGTTGAAAACGCCTCCTTTATGCCGTGGCTGGCGGGTACGGCGCTGATCCACTCGCTCGCCGTCACCGA AAAACGCGGGACGTTCAAAGCCTGGACGGTGCTGTTGGCCATCACTGCGTTCTCGCTGTGTCTGCTCGGGACTTTCCTGG TGCGCTCCGGCGTGCTGGTCTCGGTTCACTCGTTTGCCTCTGATCCGGCACGCGGCATGTTTATTCTCGCGTATCTGGTC ATTGTGATCGGCGGTTCGCTGCTGCTGTACGCCTTTAAAGGTAACTCGGTGCGTGCTCCGAGCCGTCACGAACTGCATTC CCGCGAAAGTTATTTGCTGGGCAATAACGTATTGCTGGTAGCGGCGATGCTGGTGGTGCTGCTCGGTACGCTGCTGCCGC TTATCCACAAACAGCTCGGGCTGGGCAGTATTTCTATCGGTGAACCCTTCTTTAATACGATGTTTACCTGGCTGATGGCG CCGCTGGCGCTGTTGTTAGGCATCGGACCACTGGTGCGCTGGCGTCGTGATGAGCCCAGCAAACTGTGGCGTCGTCTGGG TGTTGCGCTGGTCGTCACGCTGGTCTTGTCGATTCTTCTGCCGTGGTTGTTGCAGGATAAAATCGTCGGTATGACCGTGG TGGGAATGCTGATGTCGGTGTGGGTGATTGTGCTGACGTTGATGGAATTACACGAACGCGCCACCCATCGTCATTCATTC TGGCGCGGTCTGACCAAACTTTCACGCAGTCACTGGGGCATGGTGCTCGGCCATCTCGGCGTGGCGGTGACGGTGATCGG CATCGCGTTTAGCCAGAATTATAGCGTTGAACGTGATGTGCGCATGAAGTCCGGCGATACCGTGGATATTCATGATTATC ACTTTATTTTCCGCGATGTTCGTGACATTACCGGCCCGAACTATACCGGCGGTGAGGCGAATATTGATGTGACGCAGAAC GGCAAGCAAGTCACCACGCTGCACGCCGAAAAACGCTTCTACAGCGTGGCGCGCAGCATGATGACCGAAGCGGCCATCGA CGGCAATCTGGCGCGTGACCTGTATGCGGCGCTCGGCGAAGAGATGGACGATGGCTCGTGGGCGGTGCGTTTGTACTACA AACCCTTTGTCCGCTGGATCTGGCTCGGTGGCCTGTTTATGGCGGCCGGTGGCGTGCTGTGTATTCTCGACCCGCGTTAT CGCATGAGCAAAAAGCTTAAGAAGCAAGGTCTGACGGAGGCTGAAGAAGCATGA Protein sequence : MMPELGTFALCLALGLAVLLSIYPQWGAARQDGRMMAMARPLSYGMFACIALAFIILVHAFVVNDFTVAYVANNSNTHLP VYYRVAATWGAHEGSLLLWVLLLSCWTLAVALFSRRMPQDAVSRVLAVMGMITGGFLLFILLTSNPFIRSLPNFPVDGSD LNPVLQDIGLIFHPPLLYMGYVGFSVAFAFAIASLMAGRLDTAWARWSRPWTQAAWVFLTIGIVLGSAWAYYELGWGGWW FWDPVENASFMPWLAGTALIHSLAVTEKRGTFKAWTVLLAITAFSLCLLGTFLVRSGVLVSVHSFASDPARGMFILAYLV IVIGGSLLLYAFKGNSVRAPSRHELHSRESYLLGNNVLLVAAMLVVLLGTLLPLIHKQLGLGSISIGEPFFNTMFTWLMA PLALLLGIGPLVRWRRDEPSKLWRRLGVALVVTLVLSILLPWLLQDKIVGMTVVGMLMSVWVIVLTLMELHERATHRHSF WRGLTKLSRSHWGMVLGHLGVAVTVIGIAFSQNYSVERDVRMKSGDTVDIHDYHFIFRDVRDITGPNYTGGEANIDVTQN GKQVTTLHAEKRFYSVARSMMTEAAIDGNLARDLYAALGEEMDDGSWAVRLYYKPFVRWIWLGGLFMAAGGVLCILDPRY RMSKKLKKQGLTEAEEA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 0.0 | 73 |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 3e-129 | 53 |
