Gene Information

Name : lolD (Q7S_14810)
Accession : YP_005402742.1
Strain : Rahnella aquatilis HX2
Genome accession: NC_017047
Putative virulence/resistance : Resistance
Product : lipoprotein transporter ATP-binding subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3250121 - 3250825 bp
Length : 705 bp
Strand : -
Note : COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence : 
ATGAGTAATTCTTTATTATTGCAGTGTGAAAACCTCTGTAAGACTTATCAGGAAGGTAAAATGCACACCGACGTGCTGCG
TGACGTCAGTTTCGCTATGCAGCCGGGTGAGATGATGGCGATTGTCGGCACCTCCGGTTCCGGCAAAAGTACTTTGCTGC
ATTTGCTGGGCGGACTCGATTCCCCGACGTCCGGCGAAGTGATTTTCAAAGGTCAGTCTCTGAACGCGATGTCTTCATCG
GCGAAATCTGAATTGCGTAACCGCGAGCTGGGCTTCATCTATCAGTTCCACCATTTGCTGCCGGATTTCACCGCGCTGGA
AAACGTCGCGATGCCGCTGCTGATTGGCAAAAAGAAATCTGCCGAAGTGCAGGAACGCGCGCTGGCGATGCTTGAAGCGG
TGGGACTGCAACATCGCAGCAATCACCGTCCTTCCGAGCTTTCCGGTGGTGAACGTCAGCGGGTGGCAATTGCCCGTGCG
CTGGTGAATAATCCTTCGCTGGTGCTGGCCGATGAACCGACCGGTAATCTCGATCAGCGCAATGCCGACAGCATTTTCGA
ATTGCTCGGCGAACTGAATGTGCGCCAGGGCACGGCGTTTCTGGTGGTGACGCATGATCTGCAACTGGCGAACCGTCTGA
CGCGTCAGCTGGAAATGCGTGACGGCAAGTTGCAGCAGGAATCGATGTTGCTGGGAGCGAAGTAA

Protein sequence : 
MSNSLLLQCENLCKTYQEGKMHTDVLRDVSFAMQPGEMMAIVGTSGSGKSTLLHLLGGLDSPTSGEVIFKGQSLNAMSSS
AKSELRNRELGFIYQFHHLLPDFTALENVAMPLLIGKKKSAEVQERALAMLEAVGLQHRSNHRPSELSGGERQRVAIARA
LVNNPSLVLADEPTGNLDQRNADSIFELLGELNVRQGTAFLVVTHDLQLANRLTRQLEMRDGKLQQESMLLGAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-28 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lolD YP_005402742.1 lipoprotein transporter ATP-binding subunit NC_008702.1.4606598. Protein 1e-37 47
lolD YP_005402742.1 lipoprotein transporter ATP-binding subunit NC_012469.1.7686878. Protein 3e-40 44
lolD YP_005402742.1 lipoprotein transporter ATP-binding subunit CP001581.1.gene798.p Protein 5e-37 41