Gene Information

Name : cspE (Q7S_16275)
Accession : YP_005403035.1
Strain : Rahnella aquatilis HX2
Genome accession: NC_017047
Putative virulence/resistance : Unknown
Product : cold shock protein CspE
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3553818 - 3554027 bp
Length : 210 bp
Strand : -
Note : COG1278 Cold shock proteins

DNA sequence :
ATGTCTAAGATTAAAGGTAGCGTTAAGTGGTTCAATGAATCTAAAGGTTTTGGTTTCATTACCCCTGAAGATGGCAGCAA
AGATGTTTTCGTTCATTTCTCTGCTATTTCCAGCAACGGTTTCAAAACCCTTGCTGAAGGCCAACGCGTAGAGTTCGAAA
TCACCAATGGTGCCAAAGGCCCGTCGGCTGCTAACGTTATCGCTATCTGA

Protein sequence :
MSKIKGSVKWFNESKGFGFITPEDGSKDVFVHFSAISSNGFKTLAEGQRVEFEITNGAKGPSAANVIAI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 2e-18 75
cspH YP_216241.1 cold shock protein-like protein Not tested SPI-11 Protein 5e-07 49