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Name : secD (Q7S_17030) Accession : YP_005403186.1 Strain : Rahnella aquatilis HX2 Genome accession: NC_017047 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecD Function : - COG functional category : - COG ID : - EC number : - Position : 3721776 - 3723623 bp Length : 1848 bp Strand : - Note : COG0342 Preprotein translocase subunit SecD DNA sequence : GTGTTAAACCGTTATCCTGCGTGGAAGTATCTGATGTTGATCGTTGTGGTCATCGTCGGGCTGCTTTATGCACTTCCCAA CCTTTATGGTGAGGATCCGGCTGTTCAAATCACTGGTGCTCGGGGTTCCGACGCCAGTGAAGCAACGCTGGACCAAGTCC GTAACGTATTAGATCAAAGCAAAATCCAGATCAAATCAGTTGCTCTGGAGAATGGCGCTATTCTTGCCCGTTTTAACGAC ACGGATGTACAGCTTCGTGCACGTGAAGCGCTGACTGAAGCGTTGGGCGACAAGTTTGTTATTGCACTGAACCTCGCGCC GGCAACGCCGCGCTGGTTGAGCATGCTGGGCGCTGAGCCGATGAAGCTGGGCCTCGACTTGCGTGGGGGTGTTCACTTCC TGATGGAAGTGGATATGGATACCGCGCTGAGTAAGCTGCAAGAGCAGACGATGGACAATATGCGCAGCGACCTGCGCGAC AAGAATATTCCTTATGCCACGGTGCGTAAGCTCGACAACTATGGCGTTGAAGTGCGTTTCCGCGATGCTGCTACCCGTGA TTCTGCGGTCAGCTACCTGAGCCCACGTCACCGCGATTTAGTGATCACTAACAGTGGCGACAATGCTATCCGTGTAGTGA TGACTGATGCTCGCCTGAGTGAAGCCCGCGAGTATGCCGTTCAGCAAAACATCACCATCCTGCGTAACCGTGTAAACCAA CTGGGTGTGGCCGAGCCGCTGGTACAGCGTCAGGGTGCTGACCGTATCGTGGTTGAGTTACCGGGTATTCAGGATACTGC GCGCGCTAAAGAAATTTTGGGCGCGACCGCGACACTGGAATTCCGTCTGGTTAACACCAATGTAGATGCTTCTGCTGCTT CAACCGGTCGTGTGCCGGGCGACAGCGAAGTGAAAAACATGCGTGATGGCCGTCCGGTTGTTCTGTACAAACGCGTGATC CTGACCGGTGACCACATCACTGATTCCACATCCAGCATGGATGAGTACAATCAGCCGCAGGTTAACATCTCTCTCGACAG CGCTGGTGGTAACGCCATGTCTAACTTCACTAAGGATAACATCGGTAAACCGATGGCAACCTTGTTCGTGGAGTACAAAG ACAGCGGTAAGAAAGATGCCAATGGCCGTGCGATTCTGGCGAAGCAGGAAGAAGTTATCAACGTGGCGACCATTCAGTCA CGCCTGGGTAACAGCTTCCGTATCACCGGGGTGAACGATCCGAATGAAGCCCGCCAGTTGTCCCTTCTGTTGCGCGCCGG TGCGTTGATCGCGCCAATTCAGATAGTTGAAGAGCGTACTATCGGCCCGACCTTAGGGATGCAAAACATCACTCAGGGTC TGGAAGCGTGCTTGTGGGGTCTGGTGGCATCCATTCTGTTCATGGTGGTTTGGTACCGTAAGTTCGGCATTATCGCTACG ACAGCGCTGGTCGCTAACCTGATCCTGATTGTCGGGATCATGTCTCTGCTGCCTGGTGCGACGCTGACCATGCCGGGTAT TGCCGGTATCGTCCTGACGCTGGCGGTGGCCGTCGACGCCAACGTACTGATAAACGAACGTATCAAGGAAGAGCTGAAGA ACGGACGTTCCGTTCAGCAGGCGATTCATGAAGGCTATAAAGGCGCGTTCTCAAGTATCGTTGATGCCAACATTACGACC CTGATCACGGCAATTATTCTTTATGCAGTGGGTACCGGTTCGATTAAAGGCTTTGCTATCACCACCGCTATCGGTGTGGC AACCTCGATGTTTACGTCGATCGTGGGGACCCGTGCCATCGTGAACCTGGTTTACGGCGGCAAACGCATTAAAAAGCTGT CTATCTGA Protein sequence : MLNRYPAWKYLMLIVVVIVGLLYALPNLYGEDPAVQITGARGSDASEATLDQVRNVLDQSKIQIKSVALENGAILARFND TDVQLRAREALTEALGDKFVIALNLAPATPRWLSMLGAEPMKLGLDLRGGVHFLMEVDMDTALSKLQEQTMDNMRSDLRD KNIPYATVRKLDNYGVEVRFRDAATRDSAVSYLSPRHRDLVITNSGDNAIRVVMTDARLSEAREYAVQQNITILRNRVNQ LGVAEPLVQRQGADRIVVELPGIQDTARAKEILGATATLEFRLVNTNVDASAASTGRVPGDSEVKNMRDGRPVVLYKRVI LTGDHITDSTSSMDEYNQPQVNISLDSAGGNAMSNFTKDNIGKPMATLFVEYKDSGKKDANGRAILAKQEEVINVATIQS RLGNSFRITGVNDPNEARQLSLLLRAGALIAPIQIVEERTIGPTLGMQNITQGLEACLWGLVASILFMVVWYRKFGIIAT TALVANLILIVGIMSLLPGATLTMPGIAGIVLTLAVAVDANVLINERIKEELKNGRSVQQAIHEGYKGAFSSIVDANITT LITAIILYAVGTGSIKGFAITTAIGVATSMFTSIVGTRAIVNLVYGGKRIKKLSI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 3e-122 | 49 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 1e-121 | 49 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 1e-121 | 49 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 1e-121 | 49 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 6e-122 | 49 |
