Gene Information

Name : RTTH1527_r04275 (RTTH1527_r04275)
Accession : -
Strain : Rickettsia typhi TH1527
Genome accession: NC_017066
Putative virulence/resistance : Unknown
Product : 16S ribosomal RNA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 779765 - 781272 bp
Length : 1508 bp
Strand : -
Note : -

DNA sequence : 
GACAGAATCAAACTTGAGAGTTTGATCCTGGCTCAGAACGAACGCTATCGGTATGCTTAACACATGCAAGTCGAACGGAT
TAATTAGAGCTTGCTCTAGTTAATTAGTGGCAGACGGGTGAGTAACACGTGGGAATCTACCCATCAGTACGGAATAACTT
TTAGAAATAAAAGCTAATACCGTATATTCTCTACGGAGGAAAGATTTATCGCTGATGGATGGGCCCGCGTCAGATTAGGT
AGTTGGTGTGGTAATGGCTCACCAAGCCGACGATCTGTAGCTGGTCTGAGAGGATGATCAGCCACACTGGGACTGAGACA
CGGCCCAGACTCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGGCGAAAGCCTGATCCAGCAATACCGAGTGAGT
GATGAAGGCCTTAGGGTTGTAAAGCTCTTTTAGCAAGGAAGATAATGACGTTACTTGCAGAAAAAGCCCCGGCTAACTCC
GTGCCAGCAGCCGCGGTAAGACGGAGGGGGCTAGCGTTGTTCGGAATTACTGGGCGTAAAGAGTGCGTAGGTGGTTTAGT
AAGTTGGAAGTGAAAGCCCGGGGCTTAACCTCGGAATTGCTTTCAAAACTACTAATCTAGAGTGTAGTAGGGGATGATGG
AATTCCTAGTGTAGAGGTGAAATTCTTAGATATTAGGAGGAACACCGGTGGCGAAGGCGGTCATCTGGGCTACAACTGAC
GCTGATGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAGTGCTAGATATC
GGAGGATTCTCTTTCGGTTTCGCAGCTAACGCATTAAGCACTCCGCCTGGGGAGTACGGTCGCAAGATTAAAACTCAAAG
GAATTGACGGGGGCTCGCACAAGCGGTGGAGCATGCGGTTTAATTCGATGTTACGCGAAAAACCTTACCAACCCTTGACA
TGGTGGTTATGGATTGCAGAGATGCTTTCCTTCAGTTCGGCTGGGCCACACACAGGTGTTGCATGGCTGTCGTCAGCTCG
TGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATTCTTATTTGCCAGCGGGTAATGCCGGGAACTATA
AGAAAACTGCCGGTGATAAGCCGGAGGAAGGTGGGGACGACGTCAAGTCATCATGGCCCTTACGGGTTGGGCTACACGCG
TGCTACAATGGTGTTTACAGAGGGAAGCAAGACGGTGACGTGGAGCAAATCCCTAAAAGACATCTCAGTTCGGATTGTTC
TCTGCAACTCGAGAGCATGAAGTTGGAATCGCTAGTAATCGCGGATCAGCATGCCGCGGTGAATACGTTCTCGGGCCTTG
TACACACTGCCCGTCACGCCATGGGAGTTGGTTTTACCTGAAGGTGGTGAGCTAACGCAAGAGGCAGCCAACCACGGTAA
AATTAGCGACTGGGGTGAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATTACCTCCTTA

Protein sequence : 
-

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
FTT_r07 - 16S ribosomal RNA Not tested FPI DNA e-127 87.2
FTT_r10 - 16S ribosomal RNA Not tested FPI DNA e-127 87.2
FTM_1085 - 16S ribosomal RNA Not tested FPI DNA e-127 87.2
FTM_1695 - 16S ribosomal RNA Not tested FPI DNA e-127 87.2
FTW_2069 - 16S ribosomal RNA Not tested FPI DNA e-127 87.2
FTW_2070 - 16S ribosomal RNA Not tested FPI DNA e-127 87.2