Gene Information

Name : cspE (MARHY1578)
Accession : YP_005429478.1
Strain : Marinobacter hydrocarbonoclasticus ATCC 49840
Genome accession: NC_017067
Putative virulence/resistance : Unknown
Product : cold shock like protein, RNA chaperone, transcription antiterminator, affects expression of rpoS and uspA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1638187 - 1638396 bp
Length : 210 bp
Strand : -
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type r : regulator

DNA sequence :
ATGTCCGATACCAAAACCGGCCACGTAAAGTGGTTCAACGAATCCAAGGGCTTTGGCTTCATCGCCCAGGAAGGCGGCAG
TGACGTTTTCGTTCACTACAGTGCAATCAACGCAAACGGTTTCCGTACTCTGGCCGAAGGTCAGCAGGTACAGTTCACCG
TAACCCAGGGCCCGAAAGGCCCGCAGGCCGAAAACGTAACGCCGCTCTAA

Protein sequence :
MSDTKTGHVKWFNESKGFGFIAQEGGSDVFVHYSAINANGFRTLAEGQQVQFTVTQGPKGPQAENVTPL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 3e-17 60