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Name : glcD (RGE_02000) Accession : YP_005435044.1 Strain : Rubrivivax gelatinosus IL144 Genome accession: NC_017075 Putative virulence/resistance : Unknown Product : glycolate oxidase subunit GlcD Function : - COG functional category : - COG ID : - EC number : 1.1.3.15 Position : 207771 - 209297 bp Length : 1527 bp Strand : - Note : - DNA sequence : ATGAACGCTCCCCTGCCCGCCGACGCCGCGACTTCCGCCGCCGAGGCCCCGCCCGACGCCGCCACGCGCGCCCGACGCCA GGCCGAGGTCGTCGCCGCGCTCGGCAAGGTGCTGCCGGCGCACGCGCTGCTCTGGCAGCGCGAGGACACCACGCCTTACG AGTGCGACGGGCTCACCGCCTACCGCCAGTTGCCGCTGGCCGTCGCGCTGCCGGAAACCGAGGCCCAGGTCTCGGGCGTG CTGCGCACCTGCCACGCGCTGGGCGTGCCGGTGGTCGCACGCGGCGCCGGCACGGGGCTGTCGGGCGGCGCGATGCCGCA CGCGCTGGGCGTGACGCTGTCGCTGGCCAAGTTCAACCGCATCCTCGCCGTCGACCCGCTGGCGCGCACGGCCACCGTGC AGTGCGGCGTGCGCAACCTGGCCATCAGCGAAGCGGCGGCGCCGCACGGCCTGTACTACGCGCCCGACCCGTCGAGCCAG ATCGCCTGCACGATCGGCGGCAACGTCGCCGAGAACTCCGGCGGCGTGCACTGCCTGAAGTACGGGCTGACGATCCACAA CGTGCTGCGCGTGCGCGGCTTCACCGCCGAGGGCGAGGCCGTCGAGTTCGGCGGCCTGGCGCTGGACGCGCCGGGGCTGG ACCTGCTGGCCGCGGTGATCGGCAGCGAAGGCATGCTGGCCGTCGCCACCGAGGTCACCGTGCGCCTGGTGCCCAAGCCG CAGCTCGCGCGCTGCATCATGGCCAGCTTCGACGACGTGCGCCGCGCCGGCGACGCGGTGGCGGCGATCATCGCCGCCGG CATCATCCCCGCCGGGCTGGAGATGATGGACAAGCCGATGACCGCCGCGGTCGAGGACTTCGTGCACGCCGGCTACGACC TGACGGCCGAGGCCATCCTGCTGTGCGAGAGCGACGGCACGCCCGAGGAGGTGGCCGAGGAGGTCGCGCGCATGCTGGAC GTGCTGACCGGCTGCGGCGCGACGCGGCTGGAGGTCAGCCGCGACGAAGCCCAGCGGCTGCGTTTCTGGAGCGGGCGCAA GAACGCCTTCCCGGCGTCGGGCCGCATCAGCCCGGACTACCTCTGCATGGACTCGACGATCCCGCGCAAGCGGCTCGCCG ACATCCTGCTCGCCATCCAGCAGATGGAGCAGACCTACGGCCTGCGCTGCGCCAACGTCTTCCACGCCGGCGACGGCAAC CTGCACCCGCTGATCCTCTACGACGCCAACGACCCCGACCAGCTGCGCCGCTGCGAGGCCTTCGGCGCCGACATCCTGGA GACCAGCGTGCGCCTGGGCGGCACGATCACCGGCGAGCACGGTGTCGGCGTCGAGAAGCTGGCCAGCATGTGCGTGCAGT TCAGCCCCGAGGAGCGCGCCCAGATGGCGGCGCTGAAGACCGCCTTCGACCCGGCCGGGCTGCTGAACCCCGGCAAGGTG ATCCCGACGCTGGTGCGCTGCGTCGAAGGCGGCAAGCAGCACGTGCGGCGCGGGCTGCTGGCCTTCGCGGAACTGGAGCG CTTCTGA Protein sequence : MNAPLPADAATSAAEAPPDAATRARRQAEVVAALGKVLPAHALLWQREDTTPYECDGLTAYRQLPLAVALPETEAQVSGV LRTCHALGVPVVARGAGTGLSGGAMPHALGVTLSLAKFNRILAVDPLARTATVQCGVRNLAISEAAAPHGLYYAPDPSSQ IACTIGGNVAENSGGVHCLKYGLTIHNVLRVRGFTAEGEAVEFGGLALDAPGLDLLAAVIGSEGMLAVATEVTVRLVPKP QLARCIMASFDDVRRAGDAVAAIIAAGIIPAGLEMMDKPMTAAVEDFVHAGYDLTAEAILLCESDGTPEEVAEEVARMLD VLTGCGATRLEVSRDEAQRLRFWSGRKNAFPASGRISPDYLCMDSTIPRKRLADILLAIQQMEQTYGLRCANVFHAGDGN LHPLILYDANDPDQLRRCEAFGADILETSVRLGGTITGEHGVGVEKLASMCVQFSPEERAQMAALKTAFDPAGLLNPGKV IPTLVRCVEGGKQHVRRGLLAFAELERF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcD | CAE85245.1 | GlcD protein | Not tested | PAI V 536 | Protein | 2e-128 | 61 |
