Gene Information

Name : lolD (RGE_21560)
Accession : YP_005436996.1
Strain : Rubrivivax gelatinosus IL144
Genome accession: NC_017075
Putative virulence/resistance : Resistance
Product : lipoprotein ABC transporter ATP binding protein LolD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2254831 - 2255505 bp
Length : 675 bp
Strand : -
Note : -

DNA sequence : 
ATGAGTGAACACGATCCGGACCGCGTGCTCGACGCGGTCGAGCTGCACAAGCGTTTCCAGGAAGGCGATCTCGACGTCAC
GGTGCTGCGCGGCGTCAGCCTGCACGTGCGCCGCGGCGAGACGCTGGCCGTCGTCGGCGCCTCGGGCTCGGGCAAGAGCA
CGCTGCTGCACCTGCTGGGCGGACTGGACCGGCCGACGTCCGGCCGCGTGACGCTGATGGGCCGCGACTTCGCGACGATG
GACGCCGCCGAACAGGGCCGCTGGCGCAACCGGCACCTGGGCTTCGTCTACCAGTTCCACCACCTGCTGCCCGAGTTCAG
CGCGCTGGACAACGTGGCGATGCCGCTGCGCATCCGCCGCGAGAGCCCCGAGGCCGCGCGCGAGGCCGCCGAGCGCATGC
TGGCCGCCGTCGGCCTGGCCGCACGCGTGGCGCACCACCCGGCGCAGCTGTCCGGCGGCGAGCGCCAGCGCGTCGCGATC
GCGCGGGCGCTGGTCACGCGCCCGGCCTGCGTGCTCGCCGACGAGCCCACCGGCAACCTCGACCGCGGCACCGCCGGCGC
CGTCTTCGATCTGATGCTGGGCCTGTCGCGCGAGCAGGGCACGGCCTTCGTCGTCGTCACCCACGACGAGTCGCTGGCGG
CACGCTGCGGGCGCACGATGACCCTGGCGCGGTGA

Protein sequence : 
MSEHDPDRVLDAVELHKRFQEGDLDVTVLRGVSLHVRRGETLAVVGASGSGKSTLLHLLGGLDRPTSGRVTLMGRDFATM
DAAEQGRWRNRHLGFVYQFHHLLPEFSALDNVAMPLRIRRESPEAAREAAERMLAAVGLAARVAHHPAQLSGGERQRVAI
ARALVTRPACVLADEPTGNLDRGTAGAVFDLMLGLSREQGTAFVVVTHDESLAARCGRTMTLAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-22 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lolD YP_005436996.1 lipoprotein ABC transporter ATP binding protein LolD NC_008702.1.4606598. Protein 2e-31 48
lolD YP_005436996.1 lipoprotein ABC transporter ATP binding protein LolD NC_012469.1.7686878. Protein 2e-33 42