Gene Information

Name : RGE_30500 (RGE_30500)
Accession : YP_005437888.1
Strain : Rubrivivax gelatinosus IL144
Genome accession: NC_017075
Putative virulence/resistance : Virulence
Product : ECF subfamily RNA polymerase sigma-70 factor
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3241520 - 3242023 bp
Length : 504 bp
Strand : -
Note : -

DNA sequence : 
ATGGCGACCGATTCCGCGCTCCATCCGCAGGTCCAGACGCTGTACGCCGAGCACCACGGCTGGCTGCACGGCTGGCTGCG
CCGCCGCCTGGGCTGCGGCGAACGCGCCGCCGACCTGGCGCACGACACCTTCGTGCGCCTGCTAGCGCGCGAGGAGCCGC
TGGTGCTGCAGGAGCCGCGTGCGTTTCTCACGACGGTGGCGCAGCGGGTGCTGGGCAACCACTGGCGGCGCGAGCAGCTC
GAACGCGCCTACCTTGAGGCGCTGGCGGCGCGCCCCGAGATCGTCGCGCCGTCGCCCGAGGAGCGCGCGATGCTGCTGGA
GACGCTGCTGGAGATCGACCGCCTGCTCGACGGCCTGCCCGCCGTCGTGCGCCGCGCCTTTCTGATGGCCCAGCTCGACG
GCCTGCCGCTGGCCGAGATCGCCGCCGAGCTGGGGCTGTCGCTGGCGACCGTCAAACGCCATCTGCAGCGCGCCGGCGCA
CGCTGCTTCTTCGCCTTGCGCTGA

Protein sequence : 
MATDSALHPQVQTLYAEHHGWLHGWLRRRLGCGERAADLAHDTFVRLLAREEPLVLQEPRAFLTTVAQRVLGNHWRREQL
ERAYLEALAARPEIVAPSPEERAMLLETLLEIDRLLDGLPAVVRRAFLMAQLDGLPLAEIAAELGLSLATVKRHLQRAGA
RCFFALR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08458.1 FecI Virulence SRL Protein 2e-21 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RGE_30500 YP_005437888.1 ECF subfamily RNA polymerase sigma-70 factor VFG1049 Protein 8e-22 50