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Name : secD (RGE_04500) Accession : YP_005435294.1 Strain : Rubrivivax gelatinosus IL144 Genome accession: NC_017075 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecD Function : - COG functional category : - COG ID : - EC number : - Position : 476660 - 478567 bp Length : 1908 bp Strand : + Note : - DNA sequence : ATGAACCGCTACCCCTGGTGGAAGTACGCGATCCTCGCCTTCGCCTTCGTGGTCGGCCTGCTCTACACGGTGCCGAACTT CTACGGCGAGGCGCCCGCGGTGCAGGTGTCCTCGGGCAAGGCCACCGTCAAGATGGACCCGGCGATGGTCCAGCGCGTCG AGCAGATCCTCTCGAGCGCTGGCCTGAAGGCCGACTTCGTCCAGCTCGACGGCACCTCGGTGCGTGCGCGCTTCGACGAC ACCGACACCCAGATCAAGGCCAAGGACGCGATCGCGCACGCGCTGAACCCGGACGCCAACGACCCGACCTGGATCGTCGC GCTGAACCTGGTGTCGCGTTCGCCGCAGTGGATGGCCAGGATCCACGCGCTGCCGATGTACCTGGGCCTGGACCTGCGCG GCGGCGTGCACTTCCTGATGCAGGTCGACATGAAGGCCGCGCTGACGAAGAAGGCCGAGGCCGTCGCCGGTGACGTGCGC ACGCTGCTGCGCGACAAGAACATCCGCCACGCCGGCATCACGCGCGAAGGCAACGCCGTCGAGGTGCGCTTCCGCGAGAC GGCGCTGGCCGAGCAGGCGCGCAGCCTGCTCACCGACCAGCTGCCCGACCTACAGTGGACGCCGACGGCCGACGCCGCCA CCGGCGACACCAAGCTCGTCGGCACGCTCAAGCCGCAGGCCGCGACGCGCGTGCAGGAGCAGGCGCTCAAGCAGAACATC TCGACGCTGAACAACCGCGTCAACGAGCTCGGCGTCGCCGAGCCGGTGATCCAGCAGCAGGGCATCGACCGCGTCGTCGT GCAACTGCCGGGCGTGCAGGACACGGCCAAGGCCAAGGACATCATCGGCCGCACCGCGACGCTGGAGATCCGCCTGGTCA ACGAGACCAACGAGGCGATGGACGCGGTGCGCGGCTCGGGCCCGGTGCCCTTCGGCAGCGAGCGCTTCCTCGAGCGCGGC GGCCAGCCGGTGATCGTCTACCGCAACGTCGTGCTGACCGGCGAGAACCTCACCGACGCCCAGCCCGGCTTCGACGGCCA GACCCACGAGCCGACCGTCAACCTGACGCTGGACGCACGCGGCGCGCGCATCTTCAAGGACGTGACTCGCGAGAACGTCG GCAAGCGCATGGCCATCCTGCTCTTCGAGAAGGGCAAGGGCGAGGTCGTCACCGCGCCGGTGATCCGCAGCGAGATCGGC GGCGGCCGGGTGCAGATCTCGGGCCGCATGACGACCGAGGAGGCGAGCGACCAGGCGCTGCTGCTGCGCGCCGGCTCGCT GGCCGCGCCGATGGAGATCATCGAGGAACGCACGATCGGCCCGAGCCTGGGCGCCGAGAACATCGCCAAGGGCTTCCACA GCGTGCTGTGGGGCTTCGTCGCGATCGCGATCTTCATGTGCCTGTACTACATGCTGTTCGGCGTGTTCTCGACGCTGGCG CTGGCCTTCAACCTGCTGATGCTGATCGCGGTGCTGTCGATGCTGCAGGCGACGCTGTCGCTGCCGGGCATCGCCGCCAT CGCGCTGGTGCTGGGCATGGCGATCGACTCGAACGTGCTGATCAACGAGCGCGTGCGCGAGGAGCTGCGCCACGGCGCCA CACCGCAGGTGGCGATCAACGCCGGCTACGAACGTGCGTTCGGCACCATCCTGGACTCGAACGTCACGACGCTGATCGCC GGCCTGGCGCTGCTGGCCTTCGGGTCCGGCCCGGTGCGCGGCTTCGCCGTCGTGCACTGCCTGGGCATCCTGACCTCGAT GTTCTCGTCGGTGATGTTCTCGCGTGGCCTCGTGAACCTCTGGTACGGCCGCCAGAAGAAGCTCAAGTCGGTGTCGATCG GCCAGGTCTGGCGCCCGGACGGCGGCACTCCCGTGCCCGCCGAAGACAAGCAAAACGCCAAGGCCTGA Protein sequence : MNRYPWWKYAILAFAFVVGLLYTVPNFYGEAPAVQVSSGKATVKMDPAMVQRVEQILSSAGLKADFVQLDGTSVRARFDD TDTQIKAKDAIAHALNPDANDPTWIVALNLVSRSPQWMARIHALPMYLGLDLRGGVHFLMQVDMKAALTKKAEAVAGDVR TLLRDKNIRHAGITREGNAVEVRFRETALAEQARSLLTDQLPDLQWTPTADAATGDTKLVGTLKPQAATRVQEQALKQNI STLNNRVNELGVAEPVIQQQGIDRVVVQLPGVQDTAKAKDIIGRTATLEIRLVNETNEAMDAVRGSGPVPFGSERFLERG GQPVIVYRNVVLTGENLTDAQPGFDGQTHEPTVNLTLDARGARIFKDVTRENVGKRMAILLFEKGKGEVVTAPVIRSEIG GGRVQISGRMTTEEASDQALLLRAGSLAAPMEIIEERTIGPSLGAENIAKGFHSVLWGFVAIAIFMCLYYMLFGVFSTLA LAFNLLMLIAVLSMLQATLSLPGIAAIALVLGMAIDSNVLINERVREELRHGATPQVAINAGYERAFGTILDSNVTTLIA GLALLAFGSGPVRGFAVVHCLGILTSMFSSVMFSRGLVNLWYGRQKKLKSVSIGQVWRPDGGTPVPAEDKQNAKA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 1e-106 | 42 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 9e-107 | 42 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 9e-107 | 42 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 9e-107 | 42 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 4e-107 | 42 |
