Gene Information

Name : glcB (RGE_45930)
Accession : YP_005439425.1
Strain : Rubrivivax gelatinosus IL144
Genome accession: NC_017075
Putative virulence/resistance : Unknown
Product : malate synthase G GlcB
Function : -
COG functional category : -
COG ID : -
EC number : 2.3.3.9
Position : 4919499 - 4921688 bp
Length : 2190 bp
Strand : -
Note : -

DNA sequence :
ATGCGCACGACCTTCCACCGACTGCACGTCGACACGCTGCTGGCCCGCTTCATCGAAGACCAGGTGCTGCCCGGCACCGG
CGTCGAGCCCGCCGCCTTCTGGGCCGGCTTCGACGCCATCGTCGCCGACCTGGCGCCGAGGAACGCCGCGCTGCTGGCCG
AACGCGACCGGCTGCAGACCGAGCTCGACGCCTGGCACACCAAGCATCCGGGCCCGATCAAGAACATGGCCAAGTACCGC
GCCTTCCTCGAGAAGATCGGCTACCTGGTGCCGGTGCCGGCCAAGGTGAAGGCGACGACGAAGAACGTCGACAGCGAGCT
CGCGCTGCAGGCCGGCCCGCAGCTCGTCGTGCCGATCACCAACGCGCGCTACGCGCTCAACGCCGCCAACGCACGCTGGG
GTTCGCTGTACGACGCGCTCTACGGCACCGACGCGCTGCCCGAGAGCGACGGCGCCACGCGCGCCGGCGCCTACAACCCC
GTGCGCGGCGCCAAGGTCGTCGAGTACGCGCGCTACGTGCTCGACCGCACCGTGCCGCTGGCCAAGGGCTCGCACATCGA
CTCCACCGGCTACCGCGTCGAAGGCGGCCAGCTCGTCGTGACGCTGAAGGACGGCAAGACGGTGGCGCTGAAGAAGCCGG
CGCAGTTCGTCGGTTATCAGGGCGAGGCCGGCAGCCCGTCGTCGCTGCTGTTCGTGCACCACGGCCTGCACCTGGACCTG
CGCATCGACCGCGGCACGACGATCGGCGCCTCCGACCCGGCCGGCGTCTGCGACCTCGTCGTCGAGGCGGCGCTGTCGAC
CATCCTCGACCTGGAAGACTCGGTGGCCGTCGTCGACGGCGCCGACAAGGTGCTGGCCTACTCCAACTGGCTGGGCATCC
TGAAGGGCACGCTGACCGAGCAGGTCACCAAGGCCGGCAAGACCTTCACGCGCGGCCTGAACCCCGACCGCCGCTACACC
GGCCCGAACGGCGAGGAGGTCGTGCTGCACGGCCGCTCGCTGCTCTTCGTGCGCAACGTCGGCCACTTGATGACGACGCC
GGCGGTGCTGTTCGGCGACGACGAGCGCGAGATCCCCGAAGGCATCCTCGACGCCGTCGTCACGACGGCGATCGCGCTGC
ACGACCTGCAGCGCCATGGCGCGAACGGCATCGTCAACTCGCGCGCCGGCTCGATCTACATCGTCAAGCCGAAGATGCAC
GGCCCGGCCGAGGTGGCCTTCGCCAGCGAACTCTTCGGCCGTGTCGAGGCGCTGCTGGGCCTGCCCAAGGCCACCGTCAA
GCTCGGCATCATGGACGAGGAGCGCCGCACCAGCGTCAACCTCAAGGCCTGCATCGCCGCTGCCGCCGACCGCGTGGCCT
TCATCAACACCGGCTTCCTCGACCGCACCGGCGACGAGATGCACACCGCGATGAAGGCCGGCGCGATGCTGCGCAAGGGC
GACATGAAGGCGAGCGCCTGGATCCAGGCCTACGAGCGCCAGAACGTGCTCGTCGGGCTGGAGTGCGGTCTGCGCGGCAA
GGCGCAGATCGGCAAGGGCATGTGGGCCATGCCCGACCTGATGGGCGCGATGCTGCAGCAGAAGATCGCCCACCCGCTGG
CCGGCGCCAACACCGCCTGGGTGCCCAGCCCGACCGCGGCGACGCTGCACGCGCTGCACTACCACCAGGTCGATGTCGCC
AAGATCCAGAAGACGCTGGAGAAGACCGACGTCGACGCCGAGCGCGAGGCCCTGCTCGAAGGCCTGCTGACGGTGCCGGT
GGTCAAGAAGGCCAAGTGGAGCGAGGCCGAGATCCAGCAGGAGCTGGACAACAACGTGCAGGGCATCCTCGGCTACGTCG
TGCGCTGGGTCGACCAGGGCGTCGGCTGCTCCAAGGTGCCCGACATCCACGACGTCGGCCTGATGGAAGACCGCGCGACG
CTGCGCATCTCCAGCCAGCACATCGCCAACTGGCTGGAGCACGGCGTCGTCGACAAGGCCCGTGTGCGCGCCACCTTCAA
GCGTATGGCCAAGGTCGTCGACCAGCAGAACGCCGGCGACCCGGCCTACCGCGCGATGGCCGGCCGCGCCAAGGAGAGCG
CCGCCTTCCAGGCTGCCTGCGATCTGGTCTTCAAGGGCACCAAGCAGCCCTCCGGCTACACCGAGCCGCTGCTGCACGCC
TGGCGGCTGAAGGTGAAGGCCGCGGCCTGA

Protein sequence :
MRTTFHRLHVDTLLARFIEDQVLPGTGVEPAAFWAGFDAIVADLAPRNAALLAERDRLQTELDAWHTKHPGPIKNMAKYR
AFLEKIGYLVPVPAKVKATTKNVDSELALQAGPQLVVPITNARYALNAANARWGSLYDALYGTDALPESDGATRAGAYNP
VRGAKVVEYARYVLDRTVPLAKGSHIDSTGYRVEGGQLVVTLKDGKTVALKKPAQFVGYQGEAGSPSSLLFVHHGLHLDL
RIDRGTTIGASDPAGVCDLVVEAALSTILDLEDSVAVVDGADKVLAYSNWLGILKGTLTEQVTKAGKTFTRGLNPDRRYT
GPNGEEVVLHGRSLLFVRNVGHLMTTPAVLFGDDEREIPEGILDAVVTTAIALHDLQRHGANGIVNSRAGSIYIVKPKMH
GPAEVAFASELFGRVEALLGLPKATVKLGIMDEERRTSVNLKACIAAAADRVAFINTGFLDRTGDEMHTAMKAGAMLRKG
DMKASAWIQAYERQNVLVGLECGLRGKAQIGKGMWAMPDLMGAMLQQKIAHPLAGANTAWVPSPTAATLHALHYHQVDVA
KIQKTLEKTDVDAEREALLEGLLTVPVVKKAKWSEAEIQQELDNNVQGILGYVVRWVDQGVGCSKVPDIHDVGLMEDRAT
LRISSQHIANWLEHGVVDKARVRATFKRMAKVVDQQNAGDPAYRAMAGRAKESAAFQAACDLVFKGTKQPSGYTEPLLHA
WRLKVKAAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glcB CAE85241.1 GlcB protein, malate synthase G Not tested PAI V 536 Protein 0.0 62