Gene Information

Name : LFE_1060 (LFE_1060)
Accession : -
Strain : Leptospirillum ferrooxidans C2-3
Genome accession: NC_017094
Putative virulence/resistance : Unknown
Product : 16S ribosomal RNA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1067195 - 1068714 bp
Length : 1520 bp
Strand : +
Note : -

DNA sequence :
AGAGTTTGATCCTGGCTCAGAACGAACGCTGGCGGCGTGCCTAACACATGCAAGTCCAACGTGAAAGGGGAGCAATCCCC
CGGTAGGGTGGCAAACGGGTGAGTAAGACATGGGTGATCTACCTTAGGGATGGGGATATCCTTCCGAAAGGAGGGGCAAT
ACCGAATATTGTCCGGGACCATGAAGGGTTCCGGGGAAAGGGAGGCCTCTGATACAAGCTTTCGCCTTAAGATGAGCCCA
TGGCCCATCAGCTAGTTGGTAGGGTAAAGGCCTACCAAGGCTACGACGGGTCGCTGGTCTGAGAGGACGACCAGCCACAC
TGGCACTGAGATACGGGCCAGACTCCTACGGGAGGCAGCAGTGAGGAATATTGCGCAATGGGGGAAACCCTGACGCAGCA
ACGCCGCGTGTGGGAAGAAGGCCTTCGGGTCGTAAACCACTTTTACTCGGGACGAAAAAGGGATATCAAATAAATATCCC
CGATGACGGTACCGTGAGAATAAGCCACGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGTGGCAAGCGTTGTTC
GGAATTACTGGGCGTAAAGAGTCTGTAGGTGGTTTGTCAAGTCTTTGGTGAAAGGCCGTAGCTTAACTATGGGAATGCCA
AAGAGACTGGCAGGCTGGAGGCTGGGAGAGGGAAGCGGAATTTCTGGTGTAGCGGTGAAATGCGTAGATATCAGAAGGAA
GGCCGGTGGCGAAGGCGGCTTCCTGGAACAGTCCTGACACTGAAAGACGAAAGCGTGGGGAGCAAACAGGATTAGATACC
CTGGTAGTCCACGCCCTAAACGATGGGTACTAAGTGTGGAGGGGTTAAACCCTCCGTGCCGCAGCAAACGCAGTAAGTAC
CCCGCCTGGGGAGTACGGCCGCAAGGTTGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGTGCATGTGGTTT
AATTCGACGCAACGCGAGGAACCTTACCTAGGCTTGACATGTGGTCAGTAGCGAACCGAAAGGGGAGCGACCCGTCAAAT
CGGGCAATCACACAGGTGCTGCATGGCTGTCGTCAGCTCGTGCCGTGAGGTGTTGGGTTCAGTCCCGCAACGAGCGCAAC
CCTCGCCCTTTGTTGCCATCGGGTAAAGCCGGGCACTCTAAGGGGACTGCCAGCGACAAGTTGGAGGAAGGAGAGGATGA
CGTCAAGTCATCATGGCCTTTATGCCTAGGGCCACACACGTGCAACAATGGCCGGTACAGACGGAGGCAATGCCGAGAGG
CGGAGCAAACCCGAGAAAACCGGTCCCAGTTCGGATTGAGGTCTGCAACTCGACCTCATGAAGTCGGAATCGCTAGTAAT
CGCATATCAGAACGATGCGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCACGAAAGTTTGTTGTACCC
GAAGTCGGTGCCTTAACCTCGCAAGAGGAGAGAGCCGCCCAAGGTATGGCCGATGATTGGGGTGAAGTCGTAACAAGGTA

Protein sequence :
-

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
FTT_r07 - 16S ribosomal RNA Not tested FPI DNA e-127 84.5
FTT_r10 - 16S ribosomal RNA Not tested FPI DNA e-127 84.5
FTM_1085 - 16S ribosomal RNA Not tested FPI DNA e-213 82.8
FTM_1695 - 16S ribosomal RNA Not tested FPI DNA e-213 82.8
FTW_2069 - 16S ribosomal RNA Not tested FPI DNA e-213 82.7
FTW_2070 - 16S ribosomal RNA Not tested FPI DNA e-213 82.7