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Name : YPD4_2796 (YPD4_2796) Accession : YP_005506006.1 Strain : Yersinia pestis D106004 Genome accession: NC_017154 Putative virulence/resistance : Unknown Product : protein-export membrane protein SecD Function : - COG functional category : - COG ID : - EC number : - Position : 3545750 - 3547564 bp Length : 1815 bp Strand : - Note : - DNA sequence : ATGCTGATCGTTGTGATCTTCGTCGGTCTGCTATATGCGCTTCCCAACCTTTATGGTGAGGATCCGGCTGTTCAAATCAC TGGTGCGCGAGGAATCGCCGCCAGTGAGACAACGCTGGTCCAAGTCCGTGACGTTTTAGAAAAAGACAACATAGCGAGCA AGTCTATTGCGCTGGAAAACGGTGCAATCCTGGCTCGCTTTAGAGATCCTGATGTCCAGCTACGTGCTCGCGAAGCACTG GTGGAGGCGTTGGGTGATAAATATGTTATCGCGCTGAACCTGGCTCCGGCAACACCTTCCTGGCTTGCCAAATTGGGTGC AGAACCCATGAAATTAGGTCTTGACCTGCGAGGTGGTGTTCATTTCCTGATGGAAGTGGATATGGATACCGCGCTGGGCA AACTGCAAGAGCAAACGATGGATACCTTACGCACTGATTTGCGTGAGAAAAATATCCCGTATGCCACAGTACGTAAGCTC GATAACTATGGTGTTGAAGTGCGTTTTCGCGATGATAAAGCGCGCAATGATGCTATCAGCTACCTCTCTTCGCGCCATCG TGATTTGGTGTTCAGCTCCAATGGCAGCAACACGCTAAAAGCGGTGATGAGTGATGAGCGTTTGCGGGAAGCTCGGGAAT ATGCGGTTCAACAAAATATTACAATTCTGCGTAACCGAGTTAACCAGCTAGGTGTTGCAGAGCCGTTAGTCCAACGGCAG GGTTCTGACCGTATTGTTGTTGAACTACCGGGTATTCAAGACACCGCGCGTGCTAAAGAGATTCTGGGTGCGACTGCAAC GTTGGAATTCCGTTTAGTCAACACTAACGTTGATGCTTCTGTCGCAGCTTCTGGCCGTGTACCTGGCGATTCGGAAGTGA AAAATACCCGTGAAGGCCGCCCGGTTGTCTTGTACAAACGAGTGATCTTGACCGGTGACCATATTACTGATTCAACCTCC AGTACCGACGAGTATAACCAGGCTCAGGTTAATATCTCGCTCGATAGTGCAGGGGGGTCGACGATGTCTAATTTTACTAA AGACAATATCGGCAAGCCGATGGCGACTTTATTCGTAGAATATAAAGACAGCGGTAAAAAAGATGCGAATGGCCGGTCTA TTCTGGTTAAACAAGAAGAAGTTATCAATGTGGCGACCATCCAGTCGCGTTTAGGTAACAGTTTCCGCATTACCGGCATT GATAACCCAGCTGAAGCGCGGCAACTTTCCCTGTTACTGCGTGCTGGTGCGTTGATTGCACCTATCCAGATTGTGGAAGA GCGTACTATTGGGCCAACGTTGGGTTCCCAGAATATTGCGCAAGGCTTAGAAGCCTGCTTATGGGGTCTGGCTGTATCGA TCCTGTTTATGGTGGTTTACTACCGTAAGTTTGGTGTGATTGCCAGTACTGCACTGATGGCCAACCTGGTGTTAATCGTC GGCGTGATGTCCTTATTACCGGGGGCGACATTAACCATGCCGGGTATTGCCGGGATTGTATTGACGCTAGCGGTAGCAGT AGATGCTAACGTACTGATTAACGAGCGAATAAAAGAAGAGTATAGAAACGGGCGGACGATCCAGCAAGCGATTCATGAAG GGTACAAGGGTGCCTTCTCAAGTATCGTCGATGCGAACATAACGACGCTTATCACAGCCATTATTCTTTATGCTGTGGGT ACTGGTTCGATTAAAGGCTTTGCTATTACAACGGCAATTGGTGTTGTAACGTCAATGTTCACCGCAATAGTCGGTACTCG TGCCATCGTCAACCTGCTTTACGGCGGCAAGCGCATTAACAAGCTGTCTATTTGA Protein sequence : MLIVVIFVGLLYALPNLYGEDPAVQITGARGIAASETTLVQVRDVLEKDNIASKSIALENGAILARFRDPDVQLRAREAL VEALGDKYVIALNLAPATPSWLAKLGAEPMKLGLDLRGGVHFLMEVDMDTALGKLQEQTMDTLRTDLREKNIPYATVRKL DNYGVEVRFRDDKARNDAISYLSSRHRDLVFSSNGSNTLKAVMSDERLREAREYAVQQNITILRNRVNQLGVAEPLVQRQ GSDRIVVELPGIQDTARAKEILGATATLEFRLVNTNVDASVAASGRVPGDSEVKNTREGRPVVLYKRVILTGDHITDSTS STDEYNQAQVNISLDSAGGSTMSNFTKDNIGKPMATLFVEYKDSGKKDANGRSILVKQEEVINVATIQSRLGNSFRITGI DNPAEARQLSLLLRAGALIAPIQIVEERTIGPTLGSQNIAQGLEACLWGLAVSILFMVVYYRKFGVIASTALMANLVLIV GVMSLLPGATLTMPGIAGIVLTLAVAVDANVLINERIKEEYRNGRTIQQAIHEGYKGAFSSIVDANITTLITAIILYAVG TGSIKGFAITTAIGVVTSMFTAIVGTRAIVNLLYGGKRINKLSI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 4e-115 | 48 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 4e-115 | 48 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 4e-115 | 48 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 1e-115 | 48 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 5e-115 | 47 |
