Gene Information

Name : Hydth_0499 (Hydth_0499)
Accession : YP_005511193.1
Strain : Hydrogenobacter thermophilus TK-6
Genome accession: NC_017161
Putative virulence/resistance : Unknown
Product : cold-shock protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 491888 - 492097 bp
Length : 210 bp
Strand : -
Note : COGs: COG1278 Cold shock protein; InterPro IPR012156:IPR002059:IPR012340:IPR019844:IPR 011129:IPR016027; KEGG: hya:HY04AAS1_0926 cold-shock DNA-binding domain protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; SPTR: B4U902 Cold-shoc

DNA sequence :
ATGGCACTCAAAGGTACTGTAAAGTGGTTTAGTAAGGAGAAGGGTTATGGTTTCATAACCCGTGATGACAATCAGGGGGA
CGTTTTCGTCCATTTCTCAGCCATTCAGCAGAGAGGTTTTAAGACCTTGGAGCAGGGGCAGAGAGTAGAGTTTGAAATAG
AGGAGGACTCTAAGGGACCCAGAGCCAAGAATGTAAGACCCATCAGCTAA

Protein sequence :
MALKGTVKWFSKEKGYGFITRDDNQGDVFVHFSAIQQRGFKTLEQGQRVEFEIEEDSKGPRAKNVRPIS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 8e-16 58