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Name : ABK1_0330 (ABK1_0330) Accession : YP_005512902.1 Strain : Acinetobacter baumannii 1656-2 Genome accession: NC_017162 Putative virulence/resistance : Unknown Product : rpoB Function : - COG functional category : - COG ID : - EC number : - Position : 353928 - 357953 bp Length : 4026 bp Strand : + Note : - DNA sequence : ATGGATGCACCGTACTTATTATCGATTCAGGTCGATTCGTACAGAACATTCTTGCAAGATGGCAAATCACCAAAAAACCG CGAAGATATCGGTCTCCAAGCCGCATTTCGTTCAGTTTTTCCTATCGAAAGTTATTCTGGCAATGCTGCTTTAGAATTTG TTGAGTATAGCCTTGGTAAACCTGAGTTCGATGTACGCGAATGTATTCTTCGTGGCTCGACTTATGCGGCACCAATGCGC GTTAAAATTCGTTTGATTATTAAAGATCGCGAAACTAAATCAATTAAAGACGTACGCGAACAAGAAGTCTATATGGGTGA AATTCCACTCATGACTGAAAATGGTACCTTTGTTATCAACGGTACTGAGCGTGTAATCGTATCTCAATTACACCGTTCGC CAGGCGTATTCTTTGACCATGATAAAGGTAAGACCCACTCAAGTGGTAAAGTGTTGTATTCAGCACGTATCATTCCTTAC CGTGGTTCATGGTTAGACTTCGAATTTGATGCAAAAGACTTAGTTTACGTACGTATCGACCGTCGTCGTAAATTACTTGC TACAGTTGTGTTACGTGCACTAGGTTATAACAATGAACAGATCTTGAATTTGTTCTATGAAAAAGTACCTGTGTATCTTG ACATGGGTAGCTATCAAATTGACCTCGTACCTGAGCGTTTACGTGGTGAAATGGCTCAATTTGATATTACTGACAATGAA GGTAAAGTCATTGTTGAGCAAGGTAAACGTATTAATGCTCGTCATGTACGTCAAATGGAAGCTGCAGGTTTAACTAAGCT TTCAGTTCCTGATGAATACTTATATGAGCGTATCACTGCTGAAGATATTACTCTACGTGATGGTGAAGTAATTGCTGCAA ATACTCTGTTAAGCCATGAAGTAATGGTGAAGTTGGCAGAAGGTGGTGTTAAGCAATTTAATATCTTGTTCACTAACGAT ATTGACCGTGGTTCATTCGTAGCTGATACATTACGTGCTGACTTGACGCGTGATCGTGAAGAAGCATTAGTAGAAATCTA CAAAGTAATGCGTCCAGGCGAGCCACCAACAAAAGAAGCTGCTGAAAACTTATTCAATAACTTGTTCTTCTCTTCTGAAC GCTATGACTTATCTCCAGTAGGTCGTATGAAGTTCAACCGTCGTTTAGGTCGTCCTTACGAAGTTGGTACTGATCAGAAG TCACGCGAAGTTGAAGGTATTTTATCGCACGAAGATATTATCGATGTATTACGTACATTGGTTGAAATCCGTAACGGTAA AGGTGAAGTCGACGATATCGACCACTTAGGTAACCGTCGTGTACGTTCTGTTGGTGAAATGACAGAGAACCAATTCCGTG TAGGTTTAGTTCGTGTTGAGCGTGCTGTTAAAGAGCGTTTAAGCCAAGCAGAAACAGATAACTTGTCTCCACAAGATTTG ATTAATGCAAAACCAGTTGCTGCTGCAATCAAAGAATTCTTTGGTTCAAGCCAGTTATCTCAGTTTATGGACCAAAACAA CCCATTATCTGAGATTACACATAAACGTCGTGTATCTGCGCTTGGTCCTGGTGGTTTAACACGTGAACGTGCAGGCTTCG AAGTACGTGACGTACACCAAACTCACTATGGTCGTGTTTGTCCAATTGAAACTCCTGAAGGTCCAAACATTGGTTTGATC AACTCGCTTTCTGTATACGCAAAAGCGAATGACTTCGGTTTCTTGGAAACACCATACCGCAAAGTTGTAGATGGTCGTGT AACTGATGATGTTGAATATTTATCTGCAATTGAAGAAGTAGGTACTGTTATTGCACAGGCCGACTCTGCTGTAGATAAAG ATGGCAACTTAACAGAAGAATTCGTTTCTGTTCGTCATCAAGGTGAATTCGTACGTATGCCGCCTGAAAAAGTAACGCAT ATGGACGTTTCTGCACAGCAGGTAGTATCTGTTGCTGCATCACTTATTCCATTCCTTGAACACGATGACGCAAACCGTGC GCTCATGGGTTCAAACATGCAACGTCAGGCAGTTCCTACTTTACGTGCGGATAAACCGCTTGTAGGTACAGGTATGGAAG CGAACGTTGCACGTGACTCTGGTGTGTGTGTAATCGCAAACCGTGGCGGTGTAATTGAATATGTAGATGCTTCTCGTATC GTTATTCGTGTAAACGAAGATGAAATGGTTGCAGGTGAGGCAGGTGTAGATATCTATAACCTCATCAAATATACGCGTTC AAACCAAAATACTTGTATTAACCAAAATGTTATCGTGAACTTGGGCGACAAAGTTGCTCGTGGTGACATCTTGGCAGACG GTCCGTCAACAGACATGGGTGAACTTGCGCTTGGTCAAAACATGCGTGTAGCGTTCATGACATGGAATGGTTACAACTAC GAAGACTCGATCTTGTTATCTGAGCGTGTACTTCAAGAAGACCGTTTAACCTCTATTCACATTCAAGAATTGTCATGTGT AGCACGTGATACTAAGTTAGGTGCAGAAGAAATTACTGCCGATATTCCTAACGTAGGTGAAGCTGCGCTTTCTAAACTTG ATGAATCAGGTATCGTTTATATCGGTGCTGAAGTTACTGCTGGTGACATCTTAGTTGGTAAAGTAACGCCTAAAGGTGAA ACTCAGTTAACTCCTGAAGAAAAACTGCTTCGTGCAATTTTTGGTGAGAAAGCAGCTGACGTTAAAGACTCATCTTTACG TGTTCCATCTGGTACTAAAGGTACAGTTATTGACGTTCAAGTCTTCACTCGTGATGGCTTAGAGAAAGATGACCGTGCTT TAGCAATTGAAAAAGCACAGCTTGATTCTTATCGTAAAGACTTGAAAGAAGAATACAAGATCTTCGAAGAAGCGGCTCGT GAGCGTGTAATTCGTTTGCTTAAAGGCCAAGAGTCTAATGGCGGTGGTTCAACTAAACGTGGTGATAAACTTTCTGAAGA TTTATTATCTGGTTTAGAGCTTGTTGACTTACTTGAAATTCAACCAGCAGATGAAGCAATCGCTGAGCGTTTAACTCAAA TTCAAGTGTTCTTGAAAGAGAAGAGCGCAGAAATCGATGAGAAATTCGCTGAGAAGAAACGTAAGCTTGCAACAGGTGAT GAATTAACAACTGGTGTATTGAAAGTTGTTAAAGTTTACTTAGCTGTTAAACGTCGTATTCAGCCTGGTGATAAGATGGC TGGTCGTCACGGTAACAAAGGTGTTGTATCTAACATCTTACCTGTTGAAGACATGCCACATGATGCTAACGGTGTGCCGG TAGATATCGTATTGAACCCGCTGGGTGTACCATCTCGTATGAACGTGGGTCAGATTCTAGAGACTCACTTGGGTATGGCG GCTAAAGGGCTTGGTGACAAAATCGAAAAAATGTTGAAAGAACAACGTACAGTTTTAGAACTGCGCGAATTCTTAGACAA GATTTATAACAAAGTCGGCGGTGAGCAAGAAGATCTTGATAGCTTGACTGATGAAGAAATTCTAGCGCTTGCAGGTAACT TGCGTGCGGGTGTGCCTTTAGCTACTCCTGTATTTGATGGTGCTGAAGAAAGTCAAATTAAAGACTTACTTGAATTGGCT GACATTTCACGTACTGGTCAAACAGTATTGTTTGACGGACGTACAGGTGAACAGTTTGACCGTCCAGTAACTGTTGGTTA CATGTACATGCTTAAATTGAACCACTTGGTTGATGACAAGATGCATGCGCGTTCAACTGGTTCTTACTCACTTGTTACAC AACAACCGCTTGGTGGTAAAGCACAATTCGGTGGTCAGCGTTTCGGTGAGATGGAAGTATGGGCACTTGAAGCATACGGT GCAGCATATACACTCCAAGAAATGCTTACAGTGAAGTCGGATGACGTTGAAGGCCGTACTCGCATCTATAAGAATATTGT AGATGGTAACCATTATATGGATCCGGGTATGCCTGAATCGTTCAACGTATTGACCAAAGAGATCCGTTCTTTAGGTATCA ACATTGAACTAAAAAATGGTGACTAA Protein sequence : MDAPYLLSIQVDSYRTFLQDGKSPKNREDIGLQAAFRSVFPIESYSGNAALEFVEYSLGKPEFDVRECILRGSTYAAPMR VKIRLIIKDRETKSIKDVREQEVYMGEIPLMTENGTFVINGTERVIVSQLHRSPGVFFDHDKGKTHSSGKVLYSARIIPY RGSWLDFEFDAKDLVYVRIDRRRKLLATVVLRALGYNNEQILNLFYEKVPVYLDMGSYQIDLVPERLRGEMAQFDITDNE GKVIVEQGKRINARHVRQMEAAGLTKLSVPDEYLYERITAEDITLRDGEVIAANTLLSHEVMVKLAEGGVKQFNILFTND IDRGSFVADTLRADLTRDREEALVEIYKVMRPGEPPTKEAAENLFNNLFFSSERYDLSPVGRMKFNRRLGRPYEVGTDQK SREVEGILSHEDIIDVLRTLVEIRNGKGEVDDIDHLGNRRVRSVGEMTENQFRVGLVRVERAVKERLSQAETDNLSPQDL INAKPVAAAIKEFFGSSQLSQFMDQNNPLSEITHKRRVSALGPGGLTRERAGFEVRDVHQTHYGRVCPIETPEGPNIGLI NSLSVYAKANDFGFLETPYRKVVDGRVTDDVEYLSAIEEVGTVIAQADSAVDKDGNLTEEFVSVRHQGEFVRMPPEKVTH MDVSAQQVVSVAASLIPFLEHDDANRALMGSNMQRQAVPTLRADKPLVGTGMEANVARDSGVCVIANRGGVIEYVDASRI VIRVNEDEMVAGEAGVDIYNLIKYTRSNQNTCINQNVIVNLGDKVARGDILADGPSTDMGELALGQNMRVAFMTWNGYNY EDSILLSERVLQEDRLTSIHIQELSCVARDTKLGAEEITADIPNVGEAALSKLDESGIVYIGAEVTAGDILVGKVTPKGE TQLTPEEKLLRAIFGEKAADVKDSSLRVPSGTKGTVIDVQVFTRDGLEKDDRALAIEKAQLDSYRKDLKEEYKIFEEAAR ERVIRLLKGQESNGGGSTKRGDKLSEDLLSGLELVDLLEIQPADEAIAERLTQIQVFLKEKSAEIDEKFAEKKRKLATGD ELTTGVLKVVKVYLAVKRRIQPGDKMAGRHGNKGVVSNILPVEDMPHDANGVPVDIVLNPLGVPSRMNVGQILETHLGMA AKGLGDKIEKMLKEQRTVLELREFLDKIYNKVGGEQEDLDSLTDEEILALAGNLRAGVPLATPVFDGAEESQIKDLLELA DISRTGQTVLFDGRTGEQFDRPVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYG AAYTLQEMLTVKSDDVEGRTRIYKNIVDGNHYMDPGMPESFNVLTKEIRSLGINIELKNGD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00346 | YP_008207811.1 | DNA-directed RNA polymerase, beta subunit/140 kD subunit | Not tested | AbaR25 | Protein | 0.0 | 100 |
| BJAB0868_00350 | YP_008211676.1 | DNA-directed RNA polymerase, beta subunit/140 kD subunit | Not tested | AbaR26 | Protein | 0.0 | 100 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ABK1_0330 | YP_005512902.1 | rpoB | NC_011595.7060572.p0 | Protein | 0.0 | 100 |
| ABK1_0330 | YP_005512902.1 | rpoB | NC_010410.6003841.p0 | Protein | 0.0 | 100 |
| ABK1_0330 | YP_005512902.1 | rpoB | NC_011586.7046027.p0 | Protein | 0.0 | 100 |
| ABK1_0330 | YP_005512902.1 | rpoB | NC_010611.6233925.p0 | Protein | 0.0 | 100 |
| ABK1_0330 | YP_005512902.1 | rpoB | NC_009085.4918494.p0 | Protein | 0.0 | 99 |
| ABK1_0330 | YP_005512902.1 | rpoB | NC_010400.5987325.p0 | Protein | 0.0 | 99 |
| ABK1_0330 | YP_005512902.1 | rpoB | NC_002516.2.881699.p | Protein | 0.0 | 74 |
| ABK1_0330 | YP_005512902.1 | rpoB | CP004022.1.gene2794. | Protein | 0.0 | 71 |
| ABK1_0330 | YP_005512902.1 | rpoB | NC_002695.1.914942.p | Protein | 0.0 | 71 |
| ABK1_0330 | YP_005512902.1 | rpoB | CP000034.1.gene3741. | Protein | 0.0 | 71 |
| ABK1_0330 | YP_005512902.1 | rpoB | CP000647.1.gene4402. | Protein | 0.0 | 71 |
| ABK1_0330 | YP_005512902.1 | rpoB | CP001918.1.gene250.p | Protein | 0.0 | 70 |
| ABK1_0330 | YP_005512902.1 | rpoB | CP001138.1.gene4362. | Protein | 0.0 | 70 |
| ABK1_0330 | YP_005512902.1 | rpoB | CP000675.2.gene392.p | Protein | 0.0 | 70 |
| ABK1_0330 | YP_005512902.1 | rpoB | NC_008702.1.4609796. | Protein | 0.0 | 66 |
| ABK1_0330 | YP_005512902.1 | rpoB | CP002695.1.gene18.p0 | Protein | 0.0 | 65 |
| ABK1_0330 | YP_005512902.1 | rpoB | NC_011035.1.6448762. | Protein | 0.0 | 65 |
