Gene Information

Name : TC41_R001 (TC41_R001)
Accession : -
Strain : Alicyclobacillus acidocaldarius Tc-4-1
Genome accession: NC_017167
Putative virulence/resistance : Unknown
Product : 16S ribosomal RNA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 10728 - 12255 bp
Length : 1528 bp
Strand : +
Note : -

DNA sequence :
AGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATGCAAGTCGAGCGGACCTCTTTTGAGGTCAGC
GGCGGACGGGTGAGGAACACGTGGGTAATCTGCCTTTCAGACCGGAATAACGCCCGGAAACGGGCGCTAATATGCCGGAT
ACGCCCGCGAGGAGGCATCTTCTTGCGGGGAAAGGCCCGATTGGGCCGCTGAGAGAGGAGCCCGCGGCGCATTAGCTAGT
TGGCGGGGTAACGGCCCACCAAGGCGACGATGCGTAGCCGACCTGAGAGGGTGACCGGCCACACTGGGACTGAGACACGG
CCCAGACTCCTACGGGAGGCAGCAGTAGGGAATCTTCCGCAATGGGCGCAAGCCTGACGGAGCAACGCCGCGTGAGCGAA
GAAGGCCTTCGGGTTGTAAAGCTCTGTTGCTCGGGGAGAGCGGCATGGGGAGTGGAAAGCCCCATGCGAGACGGTACCGA
GTGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAAAACGTAGGGGGCGAGCGTTGTCCGGAATCACTGGGCGT
AAAGGGTGCGTAGGCGGTCGAGCAAGTCTGGAGTGAAAGTCCATGGCTCAACCATGGGATGGCTCTGGAAACTGCTTGAC
TTGAGTGCTGGAGAGGCAAGGGGAATTCCACGTGTAGCGGTGAAATGCGTAGAGATGTGGAGGAATACCAGTGGCGAAGG
CGCCTTGCTGGACAGTGACTGACGCTGAGGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCC
GTAAACGATGAGTGCTAGGTGTTGGGGGGACACACCCCAGTGCCGAAGGAAACCCAATAAGCACTCCGCCTGGGGAGTAC
GGTCGCAAGACTGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCAGTGGAGCATGTGGTTTAATTCGAAGCAACGCG
AAGAACCTTACCAGGGCTTGACATCCCTCTGACGGGTGCAGAGATGCACCTTCCCTTCGGGGCAGAGGAGACAGGTGGTG
CATGGTTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTCAGTCCCGCAACGAGCGCAACCCTTGACCTGTGTTACCAGCG
CGTTGAGGCGGGGACTCACAGGTGACTGCCGGCGCAAGTCGGAGGAAGGCGGGGATGACGTCAAATCATCATGCCCCTGA
TGTCCTGGGCTACACACGTGCTACAATGGGCGGTACAAAGGGAGGCGAAGCCGCGAGGCGGAGCGAAACCCAAAAAGCCG
CTCGTAGTTCGGATTGCAGGCTGCAACTCGCCTGCATGAAGCCGGAATTGCTAGTAATCGCGGATCAGCATGCCGCGGTG
AATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCACGAGAGTCGGCAACACCCGAAGTCGGTGAGGTAACCCCGA
AAGGGGAGCCAGCCGCCGAAGGTGGGGTCGATGATTGGGGTGAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTG
GATCACCT

Protein sequence :
-

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
FTM_1085 - 16S ribosomal RNA Not tested FPI DNA e-122 85.9
FTM_1695 - 16S ribosomal RNA Not tested FPI DNA e-122 85.9
FTT_r07 - 16S ribosomal RNA Not tested FPI DNA e-122 85.8
FTT_r10 - 16S ribosomal RNA Not tested FPI DNA e-122 85.8
FTW_2069 - 16S ribosomal RNA Not tested FPI DNA e-122 85.7
FTW_2070 - 16S ribosomal RNA Not tested FPI DNA e-122 85.7