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Name : secD (A1122_10015) Accession : YP_005521670.1 Strain : Yersinia pestis A1122 Genome accession: NC_017168 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecD Function : - COG functional category : - COG ID : - EC number : - Position : 2209828 - 2211675 bp Length : 1848 bp Strand : + Note : COG0342 Preprotein translocase subunit SecD DNA sequence : GTGTTAAACCGTTATCCTTTGTGGAAGTATCTGATGCTGATCGTTGTGATCTTCGTCGGTCTGCTATATGCGCTTCCCAA CCTTTATGGTGAGGATCCGGCTGTTCAAATCACTGGTGCGCGAGGAATCGCCGCCAGTGAGACAACGCTGGTCCAAGTCC GTGACGTTTTAGAAAAAGACAACATAGCGAGCAAGTCTATTGCGCTGGAAAACGGTGCAATCCTGGCTCGCTTTAGAGAT CCTGATGTCCAGCTACGTGCTCGCGAAGCACTGGTGGAGGCGTTGGGTGATAAATATGTTATCGCGCTGAACCTGGCTCC GGCAACACCTTCCTGGCTTGCCAAATTGGGTGCAGAACCCATGAAATTAGGTCTTGACCTGCGAGGTGGTGTTCATTTCC TGATGGAAGTGGATATGGATACCGCGCTGGGCAAACTGCAAGAGCAAACGATGGATACCTTACGCACTGATTTGCGTGAG AAAAATATCCCGTATGCCACAGTACGTAAGCTCGATAACTATGGTGTTGAAGTGCGTTTTCGCGATGATAAAGCGCGCAA TGATGCTATCAGCTACCTCTCTTCGCGCCATCGTGATTTGGTGTTCAGCTCCAATGGCAGCAACACGCTAAAAGCGGTGA TGAGTGATGAGCGTTTGCGGGAAGCTCGGGAATATGCGGTTCAACAAAATATTACAATTCTGCGTAACCGAGTTAACCAG CTAGGTGTTGCAGAGCCGTTAGTCCAACGGCAGGGTTCTGACCGTATTGTTGTTGAACTACCGGGTATTCAAGACACCGC GCGTGCTAAAGAGATTCTGGGTGCGACTGCAACGTTGGAATTCCGTTTAGTCAACACTAACGTTGATGCTTCTGTCGCAG CTTCTGGCCGTGTACCTGGCGATTCGGAAGTGAAAAATACCCGTGAAGGCCGCCCGGTTGTCTTGTACAAACGAGTGATC TTGACCGGTGACCATATTACTGATTCAACCTCCAGTACCGACGAGTATAACCAGGCTCAGGTTAATATCTCGCTCGATAG TGCAGGGGGGTCGACGATGTCTAATTTTACTAAAGACAATATCGGCAAGCCGATGGCGACTTTATTCGTAGAATATAAAG ACAGCGGTAAAAAAGATGCGAATGGCCGGTCTATTCTGGTTAAACAAGAAGAAGTTATCAATGTGGCGACCATCCAGTCG CGTTTAGGTAACAGTTTCCGCATTACCGGCATTGATAACCCAGCTGAAGCGCGGCAACTTTCCCTGTTACTGCGTGCTGG TGCGTTGATTGCACCTATCCAGATTGTGGAAGAGCGTACTATTGGGCCAACGTTGGGTTCCCAGAATATTGCGCAAGGCT TAGAAGCCTGCTTATGGGGTCTGGCTGTATCGATCCTGTTTATGGTGGTTTACTACCGTAAGTTTGGTGTGATTGCCAGT ACTGCACTGATGGCCAACCTGGTGTTAATCGTCGGCGTGATGTCCTTATTACCGGGGGCGACATTAACCATGCCGGGTAT TGCCGGGATTGTATTGACGCTAGCGGTAGCAGTAGATGCTAACGTACTGATTAACGAGCGAATAAAAGAAGAGTATAGAA ACGGGCGGACGATCCAGCAAGCGATTCATGAAGGGTACAAGGGTGCCTTCTCAAGTATCGTCGATGCGAACATAACGACG CTTATCACAGCCATTATTCTTTATGCTGTGGGTACTGGTTCGATTAAAGGCTTTGCTATTACAACGGCAATTGGTGTTGT AACGTCAATGTTCACCGCAATAGTCGGTACTCGTGCCATCGTCAACCTGCTTTACGGCGGCAAGCGCATTAACAAGCTGT CTATTTGA Protein sequence : MLNRYPLWKYLMLIVVIFVGLLYALPNLYGEDPAVQITGARGIAASETTLVQVRDVLEKDNIASKSIALENGAILARFRD PDVQLRAREALVEALGDKYVIALNLAPATPSWLAKLGAEPMKLGLDLRGGVHFLMEVDMDTALGKLQEQTMDTLRTDLRE KNIPYATVRKLDNYGVEVRFRDDKARNDAISYLSSRHRDLVFSSNGSNTLKAVMSDERLREAREYAVQQNITILRNRVNQ LGVAEPLVQRQGSDRIVVELPGIQDTARAKEILGATATLEFRLVNTNVDASVAASGRVPGDSEVKNTREGRPVVLYKRVI LTGDHITDSTSSTDEYNQAQVNISLDSAGGSTMSNFTKDNIGKPMATLFVEYKDSGKKDANGRSILVKQEEVINVATIQS RLGNSFRITGIDNPAEARQLSLLLRAGALIAPIQIVEERTIGPTLGSQNIAQGLEACLWGLAVSILFMVVYYRKFGVIAS TALMANLVLIVGVMSLLPGATLTMPGIAGIVLTLAVAVDANVLINERIKEEYRNGRTIQQAIHEGYKGAFSSIVDANITT LITAIILYAVGTGSIKGFAITTAIGVVTSMFTAIVGTRAIVNLLYGGKRINKLSI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 8e-122 | 48 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 4e-122 | 48 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 4e-122 | 48 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 2e-122 | 48 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 4e-122 | 48 |
