Gene Information

Name : lolD (A1122_17750)
Accession : YP_005523187.1
Strain : Yersinia pestis A1122
Genome accession: NC_017168
Putative virulence/resistance : Resistance
Product : lipoprotein transporter ATP-binding subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3806683 - 3807387 bp
Length : 705 bp
Strand : -
Note : COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence : 
ATGAGTAATCATCCTTTATTACAATGTATAAACCTGTGCAAGCGTTATCAGGAAGGCCAACTGCATACTGATGTCCTGCG
CAATGTCTCTTTCGCTATCGAGCCTGGTGAACTGATGGCGATTGTCGGCAGTTCAGGTTCAGGTAAAAGCACGCTGTTGC
ATTTGCTGGGGGGGCTGGATTCACCTACCTCTGGTGAGGTTATTTATCAGGGGCGTTCGCTTAACCAACTCTCTTCTACC
GCGAAAGCTGAATTGCGTAATCGGGAGTTAGGTTTTATCTATCAATTTCATCATTTGTTGCCCGATTTTACCGCGTTAGA
AAATGTCGCCATGCCATTACTCATCGGCGGCAGTAAACCCGCTGAAGCGCAAGAGAAAGCCCATGAGATGCTGGCGGCGG
TGGGGTTGGAGAAGCGCAGTAAACATCGTCCATCGGAGTTATCAGGGGGAGAGCGCCAACGGGTCGCTATCGCCCGTTCT
TTGGTAAATAACCCATCGCTGGTATTGGCAGATGAACCTACCGGTAATCTGGACCAACGCAATGCCGACAGTATTTTTAA
TCTGTTAGGTGAATTGAATGTTCGTCAGGGGACCGCGTTTCTGGTGGTGACTCACGATTTACAATTAGCGAAACGGATGA
GCCGTCAACTTGAAATGCGAGATGGTCAGCTACAACACCATTTGACGCTGGTGGGGGCCGAGTGA

Protein sequence : 
MSNHPLLQCINLCKRYQEGQLHTDVLRNVSFAIEPGELMAIVGSSGSGKSTLLHLLGGLDSPTSGEVIYQGRSLNQLSST
AKAELRNRELGFIYQFHHLLPDFTALENVAMPLLIGGSKPAEAQEKAHEMLAAVGLEKRSKHRPSELSGGERQRVAIARS
LVNNPSLVLADEPTGNLDQRNADSIFNLLGELNVRQGTAFLVVTHDLQLAKRMSRQLEMRDGQLQHHLTLVGAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-28 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lolD YP_005523187.1 lipoprotein transporter ATP-binding subunit NC_008702.1.4606598. Protein 2e-39 48
lolD YP_005523187.1 lipoprotein transporter ATP-binding subunit NC_012469.1.7686878. Protein 2e-40 46