Gene Information

Name : CDBI1_16415 (CDBI1_16415)
Accession : YP_006200407.1
Strain :
Genome accession: NC_017179
Putative virulence/resistance : Resistance
Product : two-component system response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3746592 - 3747422 bp
Length : 831 bp
Strand : -
Note : COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

DNA sequence :
TTGTCTATTAGAGATGTTACTATTAGTAATGTAAAAGCAAGAGTAGTGAATATAAAAAAACAAGATATTGATACTGCAAG
ATTAGAATATAATAAATTTTTATGGAGAGATTTCAATATGGATACATATTTTAATAAAAAAATATTACTTGTTGATGATG
AAAAAGATATAGTAGATTTAATTGAAGAAGTACTCATAAATGATGGTTTTAAAAACATTATTAAAGCTTATAATGGTTTA
GATGCTATTTCGCTGTGTAAGATAGCATGTCCAGATGTTGTCATTCTTGATATAATGTTACCAGATATAGATGGTATAGA
AGTGTGTAAAAAAATTCGAGAGTTTTCATACTGTTCTATTCTTTTTTTATCATCAAAAAATGATGATATTGACAAAATAC
TAGGTCTTAGTAGTGGGGGAGATGACTATATAACAAAGCCATTCAGTCCAAGAGAAATTGCTTTTCGAGTTAAAGCGCAA
TTACGTAGACAACAGTATCAAAGCATTGTACCATCAGATAGTGCAGTTATTAAAATAGGAGATATTACTATTGATATAGA
AGGAAACCGTGTATATAAAGATAGAAATGAGATTGAGTTAACTGGAAGGGAGTATCATCTTTTAAGCTACATGGCTCAAA
ATGTAAATAAAATTATAGGAAAAGAAAGACTCTATGAACAAGTATGGGGAGTATATAGTAGTATTTGTGACAATACAATT
ATGGTGCATATACGACATATAAGAGAAAAAATTGAAGATAACCCCTCAAATCCTAAAATACTTATAACGGTTAAAGGACT
AGGATATAAACTTGTGAATAGAATCGATTAG

Protein sequence :
MSIRDVTISNVKARVVNIKKQDIDTARLEYNKFLWRDFNMDTYFNKKILLVDDEKDIVDLIEEVLINDGFKNIIKAYNGL
DAISLCKIACPDVVILDIMLPDIDGIEVCKKIREFSYCSILFLSSKNDDIDKILGLSSGGDDYITKPFSPREIAFRVKAQ
LRRQQYQSIVPSDSAVIKIGDITIDIEGNRVYKDRNEIELTGREYHLLSYMAQNVNKIIGKERLYEQVWGVYSSICDNTI
MVHIRHIREKIEDNPSNPKILITVKGLGYKLVNRID

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sboR YP_006309915.1 SboR Not tested FWisland_1 Protein 9e-36 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CDBI1_16415 YP_006200407.1 two-component system response regulator AM180355.1.gene1830. Protein 6e-38 45
CDBI1_16415 YP_006200407.1 two-component system response regulator NC_012469.1.7685629. Protein 8e-39 45
CDBI1_16415 YP_006200407.1 two-component system response regulator NC_002952.2859905.p0 Protein 5e-43 45
CDBI1_16415 YP_006200407.1 two-component system response regulator NC_009782.5559369.p0 Protein 5e-43 45
CDBI1_16415 YP_006200407.1 two-component system response regulator NC_002951.3237708.p0 Protein 5e-43 45
CDBI1_16415 YP_006200407.1 two-component system response regulator NC_007622.3794472.p0 Protein 5e-43 45
CDBI1_16415 YP_006200407.1 two-component system response regulator NC_003923.1003749.p0 Protein 4e-43 45
CDBI1_16415 YP_006200407.1 two-component system response regulator NC_002758.1121668.p0 Protein 5e-43 45
CDBI1_16415 YP_006200407.1 two-component system response regulator NC_009641.5332272.p0 Protein 5e-43 45
CDBI1_16415 YP_006200407.1 two-component system response regulator NC_013450.8614421.p0 Protein 5e-43 45
CDBI1_16415 YP_006200407.1 two-component system response regulator NC_007793.3914279.p0 Protein 5e-43 45
CDBI1_16415 YP_006200407.1 two-component system response regulator NC_002745.1124361.p0 Protein 5e-43 45
CDBI1_16415 YP_006200407.1 two-component system response regulator DQ212986.1.gene4.p01 Protein 1e-36 44
CDBI1_16415 YP_006200407.1 two-component system response regulator AF130997.1.orf0.gene Protein 5e-34 43
CDBI1_16415 YP_006200407.1 two-component system response regulator NC_005054.2598277.p0 Protein 8e-38 41
CDBI1_16415 YP_006200407.1 two-component system response regulator NC_014475.1.orf0.gen Protein 8e-38 41
CDBI1_16415 YP_006200407.1 two-component system response regulator NC_012469.1.7686381. Protein 5e-36 41
CDBI1_16415 YP_006200407.1 two-component system response regulator AF155139.2.orf0.gene Protein 7e-34 41