|
Name : lysS (CDBI1_17395) Accession : YP_006200600.1 Strain : Genome accession: NC_017179 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 3958246 - 3959775 bp Length : 1530 bp Strand : - Note : COG1190 Lysyl-tRNA synthetase (class II) DNA sequence : ATGAAAAATAATCAACAAAGCAATGAAGAAGCGCAAATTCAAGAAGACCTTAGTGAAGTACTTCAAGTAAGAAGAGATAA ACTAAAAAAATTACAAGAGTCAGGTAGAGATCCTTTTAAAGAAAGTAGATATGATAGAACTCATTATTCTATGGATATAA AAGATAACTTTGATTCTCTTGAAGGTAAAACTACAAAAATAGCAGGACGTATAATGAGCAAGAGAATACAAGGGAAAGCT GGCTTTATAGATATTCAAGACCAAGAGGGAAGAATCCAATCTTATGTAAGACTAGATGCTATAGGAGAGGAAGAATATAG TGTATTTTCAACATATGATATTGGAGATATAGTTGGAATTGAAGGAGAAATCTTTAAAACTAAAAAAGGTGAAATATCTG TAAAGGCTAAATCTGTAGTATTACTATGTAAATCTTTACAAGTTTTACCAGAAAAATATCATGGATTAAAAGACCAAGAA CTAAGATATAGACAAAGATATGTTGACTTAATAGTAAATCCAGAAGTAAAAAATGCTTTTTTAATTAGAACAAAAGCATT AAAAGCATTAAGAGCATACTTAGATGATAGAGGATTTTTAGAAGTTGAGACTCCAATATTAAATACTATAGCAGGTGGGG CAAATGCTAGACCATTTATAACTAATCATAATACTTTACATATACCAATGTATTTAAGAATAGCAAATGAATTGTATTTA AAAAGACTTATTGTTGGTGGATTTGATAAAGTTTATGAAATGGGAAGAATGTTTAGAAATGAAGGTATGGATTTAAAACA TAATCCTGAATATACTGCAATAGAATTATATCAAGCATATGCAGACTATACTGATATGATGGAAATAACAGAAAATGTTA TTGCACATATGGCTGAAGTTGCTACAGGAAGTATGATAGTTAACTATCAAGGAACAGAAATAAACTTTACACCACCTTGG AAAAGAATGAGTATGGAAGATTGTGTTAAAGAATATTCTGGTGTAGATTTTTCTACTATAAATACAGATGAAGAGGCACT AGAAGTTGCTAGAGAAAAAGGTATAGAGATAAAACCTGGAATGAGAAGAGGAGAAGTAATAAATGCTTTCTTTGAAGAAT TTGGAGAAGATAAATTAATCCAACCAACATTTATAACTCATCATCCAGTTGAAGTATCTCCATTATCTAAGAGAAATGTT GAAGACCCAAGAAGAACTGATAGATTTGAGGCATTTGCTAATAAGTGGGAGTTAGCTAATGCATTTTCTGAACTTAATGA CCCTATTGACCAAAAAGGAAGATTTATAGACCAATTGAGAAAAAGAGAATTAGGTGATGATGAAGCTTTTGAAATGGATG AAGATTTCTTAAAAGCATTAGAGGTAGGTCTACCTCCTACAGGAGGACTAGGAATAGGTATAGATAGAGTAATTATGTTA TTAACTAACTCTCCATCTATAAGAGATGTATTATTATTCCCGACTATGAAACCTATTGATAACAATCCAAATAAAGAAGA AGAAAACTAA Protein sequence : MKNNQQSNEEAQIQEDLSEVLQVRRDKLKKLQESGRDPFKESRYDRTHYSMDIKDNFDSLEGKTTKIAGRIMSKRIQGKA GFIDIQDQEGRIQSYVRLDAIGEEEYSVFSTYDIGDIVGIEGEIFKTKKGEISVKAKSVVLLCKSLQVLPEKYHGLKDQE LRYRQRYVDLIVNPEVKNAFLIRTKALKALRAYLDDRGFLEVETPILNTIAGGANARPFITNHNTLHIPMYLRIANELYL KRLIVGGFDKVYEMGRMFRNEGMDLKHNPEYTAIELYQAYADYTDMMEITENVIAHMAEVATGSMIVNYQGTEINFTPPW KRMSMEDCVKEYSGVDFSTINTDEEALEVAREKGIEIKPGMRRGEVINAFFEEFGEDKLIQPTFITHHPVEVSPLSKRNV EDPRRTDRFEAFANKWELANAFSELNDPIDQKGRFIDQLRKRELGDDEAFEMDEDFLKALEVGLPPTGGLGIGIDRVIML LTNSPSIRDVLLFPTMKPIDNNPNKEEEN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 4e-98 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_006200600.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 2e-98 | 47 |
