|
Name : RAM_26645 (RAM_26645) Accession : YP_005533263.1 Strain : Amycolatopsis mediterranei S699 Genome accession: NC_017186 Putative virulence/resistance : Unknown Product : major facilitator superfamily transporter Function : - COG functional category : - COG ID : - EC number : - Position : 5798610 - 5799917 bp Length : 1308 bp Strand : - Note : COG0477 Permeases of the major facilitator superfamily DNA sequence : GTGAGCAGCCGCGCGGTCGCGGCCCGGCCCTTGCGGCGGGTCGCCGTGGCGAGCGCGGTGGGGACCACCATCGAGTGGTA CGACTACTTCATCTACAGCACGGCGACGGCGCTCGTGTTCGGCAAGCTGTTCTTCACGACGCTGTCGCCCGCTTCCGGGA CCCTGGCCGCGTTCGCGACGCTCGGGGTCGGGTTCCTGGCCCGCCCGGTCGGCGGGATCCTCTGGGGCCACTTCGGCGAT CGCGTGGGCCGCAAGGCGATGCTGGTGCTGTCACTGCTGCTGATGGGCGTGGCCACCGTCGGCGTCGGGCTGCTGCCGAC GTACTCCGCGATCGGGGTCTGGGCGCCCGTCCTGCTGCTCGTCCTGCGGCTGCTGCAGGGGCTGAGCGCGGGCGGCGAAT GGGGCGGGGCGGCGCTGATGGCGGTCGAGCACGCGCCCGAGGGGCGCCGCGGCCGGTACGGCGCGTTCTCGCAGATCGGC GTCCCGGCCGGATTGATCCTGGCGCAGCTGATGTTCTTCGTCCTCGGCCGCGCGCTGACCGACGCGCAGTTCGCCGCGTG GGGCTGGCGGGTGCCGTTCCTGGCGAGCATCGTGCTCGTCGGCATCGGCCTGGTGATCCGGCTGCGGATCGAGGAAAGCC CGGTGTTCTCCCGGTTGCGGGAGGCGGAGGAGCGCAGCAGCCGGCCGATGGTCGACGTGCTGCGCGAGCGGCCGCGGGCA CTGCTGGTGGCCTCCGGCAGCTTCATCGCCAACACCGCGATCGGGTACATCTTCCTGGCCTACCTGCTGTCCTACGGCAC CTCGGTGCTCAAGATCAACCGCACCACACTGCTCGTCGTGGTGATCGTGGGCAGCGTGACCTGGCTGGTGAGCATCCTCG CCTCGGCGGCGTGGTCCGACCGCGTGGGCCGCAAACCGGTGTACCTGGCCGGATCGGTGCTCCTGGTGGTCTGGCCGATC CCGTTCTTCCTGCTCGTCGACACGCGGGCGACGGCGTGGCTGATCGTGGCGGTGGTGGTGCTCAACATCGGCCTCGGGGC CACCTACGGGCCGCAGTCGGCGTTGTTCGCGGAGCTGTTCGAGCCGCGTTACCGCTACAGCGGGGCTTCGTTCTCCTACG CCGTCGGCGCGGTACTGGGCGGTGGCTTCGCGCCGTTGATCGCGACGGCGTTGCAGACCGCCACCGGCACTTCGCTTTCG GTGTCGCTCTACCTGGTGGCCGTGGCGGTGCTGAGCCTGGTCGCGGTGCTGTTCATCCCCCGGGATCAGAGCCGGTCGAG CCGGACGGCGGCGGCCATCCGCTCGTAG Protein sequence : MSSRAVAARPLRRVAVASAVGTTIEWYDYFIYSTATALVFGKLFFTTLSPASGTLAAFATLGVGFLARPVGGILWGHFGD RVGRKAMLVLSLLLMGVATVGVGLLPTYSAIGVWAPVLLLVLRLLQGLSAGGEWGGAALMAVEHAPEGRRGRYGAFSQIG VPAGLILAQLMFFVLGRALTDAQFAAWGWRVPFLASIVLVGIGLVIRLRIEESPVFSRLREAEERSSRPMVDVLRERPRA LLVASGSFIANTAIGYIFLAYLLSYGTSVLKINRTTLLVVVIVGSVTWLVSILASAAWSDRVGRKPVYLAGSVLLVVWPI PFFLLVDTRATAWLIVAVVVLNIGLGATYGPQSALFAELFEPRYRYSGASFSYAVGAVLGGGFAPLIATALQTATGTSLS VSLYLVAVAVLSLVAVLFIPRDQSRSSRTAAAIRS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_1067 | YP_853084.1 | shikimate transporter | Not tested | PAI IV APEC-O1 | Protein | 3e-61 | 42 |
