Gene Information

Name : RAM_47540 (RAM_47540)
Accession : YP_005537430.1
Strain : Amycolatopsis mediterranei S699
Genome accession: NC_017186
Putative virulence/resistance : Resistance
Product : peptide ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 10125320 - 10126021 bp
Length : 702 bp
Strand : -
Note : COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence :
GTGGACCCGAACACGCCACACGCGACGAACGGCCCGGTGCTGTCCGGCCGCGGGCTGGTGAAGCGCTACGGCACCCAGCA
CGCCCTGGCCGGCATCGACATCGACATCCAGCCGCGGGACGCCGTCGCCATCGTCGGGCCGTCCGGCTCGGGGAAGACGT
CGCTGCTGCACGTCCTGGCCGGCATCCTCCGGGCCGACGACGGGCAGATCTTCCTGAGCGGGCAGCGGATCGACCACCTC
GGCGAGAAGAAGCGCAGCGAACTGCGCCGGACCGAGTTCGGGTTCGTCTTCCAGTCGGGGATGCTGGTCGCGGAGCTGTC
GGCCGAAGAGAACGTCGCGCTGCCGTCGCTGCTGGCCGGGCTCGGCCGCAAGGAGGCCATCGACGCCGGCCGCCAGTGGC
TTTCGCGGCTCGGCCTGGCCGGCAAGGAGCGCCGCCGTCCCGGCGAGCTCTCCGGCGGCGAGGCCCAGCGCGTCGCGATC
GCGCGGGCGCTGACCCATCGGCCGAAGGTGATCTTCGCCGACGAGCCGACCGGCGCGCTCGACACGCGCACCGGCCGCGA
GACGATGGACGCCCTCCTCGGCGCCGCCCACGAGACCGGCGCCGCGGTGCTCGTGGTGACGCACGACCGCGAGCTGGCCG
AGTCGATGCCGAAGACCGTCGCCATCCGCGACGGCCTGATCGCGACGAGGCTGGCGGCGTGA

Protein sequence :
MDPNTPHATNGPVLSGRGLVKRYGTQHALAGIDIDIQPRDAVAIVGPSGSGKTSLLHVLAGILRADDGQIFLSGQRIDHL
GEKKRSELRRTEFGFVFQSGMLVAELSAEENVALPSLLAGLGRKEAIDAGRQWLSRLGLAGKERRRPGELSGGEAQRVAI
ARALTHRPKVIFADEPTGALDTRTGRETMDALLGAAHETGAAVLVVTHDRELAESMPKTVAIRDGLIATRLAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 8e-23 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RAM_47540 YP_005537430.1 peptide ABC transporter ATPase NC_008702.1.4606598. Protein 1e-29 44