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Name : ABED_1705 (ABED_1705) Accession : YP_005539232.1 Strain : Arcobacter butzleri ED-1 Genome accession: NC_017187 Putative virulence/resistance : Unknown Product : DNA-directed RNA polymerase subunit beta Function : - COG functional category : - COG ID : - EC number : - Position : 1766908 - 1771056 bp Length : 4149 bp Strand : - Note : - DNA sequence : ATGTTAAACTCTTTAAAATCTGGTAATAGACTTAGAGTTGATTTTGCAAAAAATCCACAAAAAATTGAAATTCCAAACTT ACTACAGTTACAACAAACTTCATATGACACATTTTTAATGATTGGTCAAGAAGATAGAACTACTGCTGGTATAGAAAAAG TATTCAAATCTATTTTTCCAATTCATGATGTTCAAAATAGACTTACACTTGATTATTTAGGTAGCGAAGTTGGTAAACCT AAATATGATGTTAGAGAGTCAATGGTTAGAGGACTAACTTATTCAATTCCTCTTAAAATTAATATTAGATTAACTTTATG GGATTTAGACGAAAAAACTGGTGAAAAAATCGGTGTTAAAGATATGAAAGAACAATCTTTATTCATCAGAGAAATTCCTT TAATGACTGATAGAACATCTTTTATTGTTAATGGTGTTGAAAGAGTTGTTGTTAATCAATTACATAGATCTCCTGGTGTT ATCTTCAAAGAAGAAGAATCAAATACTGCTGATAATAAACTTATTTATACTGGACAAATTATTCCAGACCGAGGTTCTTG GCTATACTTTGAATACGATTCAAAAGATGTATTATATGTAAGAATTAATAAAAGAAGAAAAGTTCCTGTAACAATTCTAT TTAGAGCATTAGGTTATTCTAAAGAAGATATTATCAAACTATTTTATCCAATTGTTAATATTAAAATTAAAAATAATAAA TTTTTAACTGAATTTAATCCTGACGATTTTATGGGAAGAATTGAATTTGACGTTAAAGATGATAAAGGTAACTTAGTTAT TGGTGCTGGAAAAAGATTAACTGTTAGAAAAGCTAAAGCTTTAATTGAAGGTGGATTAAAATTAATTGAATATCCTCTTG AACTTTTAATGGATAGAAGTACAGCAAATACAATTTATGATCCAGAATCTGGAGAAGTTTTATTTGATGCTTTAACAAAT CTTGATGAATTAAAATTAAAAAAACTTTTAGATTTAGGATTTGAGTCATTTGATATTGCAAATGATTTAGCTGTTGGAAT TGATGCTTCTATTATAAATGCATTTAAAGCTGATGCTGAATCTTTAAAATTGTTAAAACAAACAGAACAAATTGATGATG AAAATGATTTAGCAGCAATTAGAATTTATAAAGTTATGAGACCAGGTGAGCCTGTAACTAAAGAAGCTGCAAAAGATTTT GTTAAAAAACTTTTCTTTGATCCAGAAAGATATGATTTAACAAAAGTTGGAAGAATGAAAATGAATCATAAATTAGGTGT AAATGTACCTGAGTACGTTACAACTTTAACTTATGAAGATGTTATCAAAACTGTTCAATATTTAGTAAAAGTTAAATCTG GTCACGGTCATATCGATGATAGAGATCACTTAGGAAATAGAAGAATTAGAGCAATTGGTGAATTACTTGCAAATGAATTA CATGCTGGTTTAATCAAAATGCAAAAAGCTATTAGAGATAAAATGACTACTTTAAGTGGAACATTAGAAGACTTAATGCC ACATGATTTAGTTAACTCTAAAATGATTACTTCAACAATTACTGAATTTTTTACAAGTGGTCAATTATCTCAATTTATGG ATCAAACAAATCCATTATCAGAAGTTACTCATAAAAGAAGACTTTCTGCATTAGGAGAGGGTGGTTTAGTAAAAGAGAGA GCTGGATTTGAAGTAAGGGACGTTCACCCAACTCACTACGGAAGAATCTGTCCAGTTGAAACTCCAGAGGGTCAAAATAT TGGACTTATCAATACTTTATCAACTTTCTCAAAAGTTAATGATTTAGGATTTATTGAAGCTCCATATAAAAAAGTTGTAG ATGGTGTTGTTACTAATGAAATTTCATACTACACAGCAACTCAAGAAGAGGGGCTTGTAATTGCTCCTGGTTCAACAAAA GTTGATGAGAATGGAAAAATTATTGAACCATTGATTGAAGTTAGAAAAAATGGTGAAATTTTATTAATGGAAAGAAATAG TGTTGATTTAATAGATATTTCTTCTCAAATGGTTATGGGGGTTGCAGCTTCTTTAATTCCATTCTTAGAACATGATGATG CCAATAGAGCACTTATGGGTTCAAACATGATGAGACAAGCGGTTCCTCTATTAAGACCAAGTGCTCCTGTTGTTGGAACT GGATTAGAAAAAATCGTTGCACGTGATGCTTGGGAAGCGATTAAAGCTAATAGAGCTGGACTTGTAGAAAAAGCAGATGC AAAAAATATTTACATCAGAGGTGAAGATGAAAATGGTGCTTTCATTGATCACTACACTGTAAATAAAAATGTAAGAACAA ATAATAATACATCATTTGGACAAAGAATTGCAGTTAAAGAGGGTGATTTTGTTCAAAAAGGTCAAGTAATTGCTGATGGT CCATCTATGGATAAAGGTGAACTTGCTGTTGGTATTAATGCAATGGTTGCATTTATGCCATGGAATGGATATAACTACGA AGATGCTATTATTTTAAGTGAAAGATTAATTGAAGAAGATGCGTTCACATCTGTTCATATTTATGAAAAAGAGATTGAAT GTAGAGAATTAAAACATGGTAATGAAGAAATAACAAGAGATTTACCAGGTGTAAAAGAAGAATCAATTTCTCATTTAGAT AATTCAGGAATCGTAAAAGTAGGAACTTATATTACTCCTGGAATGATTTTAGTTGGAAAAGTAACTCCTAAAGGTGAAAT TAAACCAACTCCAGAAGAAAGATTACTTAGAGCAATTTTTGGTGAAAAAGCAGGACATGTAATAAATAAATCTTTAGTAT GTCCAACATCAATGGAAGGTACAGTTGTTGATGTAAAAGTATTCACTAAAAAAGGTTATGAAAAAGATGATAGAGCTGTA GCTGAAATTGAATCAGAAAAAGCAGAACTTGATTTAAAACACCATGATAAATTATTGATGTTAGATAGAGAAGAGATTTT AAAAATTAATGATTTATTATTAAAAGCTACTTTAACAAAAGATGTAGAATTAGATGATGTTGTTTATAAAAAAGGTGAAA CAATTCCTGTTGATGTTTTAAACAATGTTAATAGATTTGCTATGAAAAAAGTTGTATCTTCATATTCTAAAGAGATAGAA AAAGCATATAATGATATTAAAGAATACTTTATTAAACAAAAAGCGCATTTAAGAGAAGAGCATGAAGAAAAACTTCAAAT CTTAGAACACGATGATATTTTATCTTCAGGTGTTATAAAACAAGTAAAAGTTTATATAGCAACTAAAAGAAAAATCAAAG TTGGGGATAAAATGGCTGGGCGACACGGAAACAAAGGTATCGTTTCTAACATCGTTCCAAAAGTTGATATGCCATATTTA GAAGATGGAACAACAGTTGATGTTATTTTAAATCCACTAGGGGTTCCTTCTAGGATGAATATTGGGCAAATTCTTGAAGT TCACTTAGGATTAGCTGGTAAAAAACTTGGTAACCAAATTCAAGATATTTTTGAAGCAAAAAGAGCTGATTTTATTGCAG AACTAAGAGCAAAAATGACTGAAATTGCAAGTGTTGCTAAACTTATGAATGGTAAAGCATTTATGGATTCTTTAAATGAT GAAGAATTAGTTCAATACGCACAAGATTGGGCAAAAGGTGTAAGATTTGCTACTCAAATCTTTGATGGAGTAAAAGCAGA AGAATTTGCAAAATTATTTGAATTAGCAAAAATTGATAGTGATGGAAAATGTGTTCTTTTTGATGGAAAAACTGGTGAAA AAATGAAAGAAAGAGTAAACGTAGGTTATATGTATATGCTTAAACTTCACCACTTAGTTGACGAAAAAGTTCATGCAAGA AGTACAGGACCATATTCTCTTGTAACACAACAACCAGTTGGAGGAAAAGCTCTATTTGGTGGACAAAGATTTGGAGAGAT GGAAGTTTGGGCATTAGAAGCTTATGGTGCAACAAATGTACTTAAAGAGATGCTTACAACAAAATCAGATGATGTTGAAG GTAGAACAAAAGCTTATAGAGCAATTGCGAATGGTGAAAATGTTCCTAATTCTGGAGTTCCAGAGACATTCTTCGTATTA ACAAAAGAGTTAAAAGCTCTAGCACTAGATGTAGAGATTTTTGGAGAGGTAGAAAACAATGAGCAATAA Protein sequence : MLNSLKSGNRLRVDFAKNPQKIEIPNLLQLQQTSYDTFLMIGQEDRTTAGIEKVFKSIFPIHDVQNRLTLDYLGSEVGKP KYDVRESMVRGLTYSIPLKINIRLTLWDLDEKTGEKIGVKDMKEQSLFIREIPLMTDRTSFIVNGVERVVVNQLHRSPGV IFKEEESNTADNKLIYTGQIIPDRGSWLYFEYDSKDVLYVRINKRRKVPVTILFRALGYSKEDIIKLFYPIVNIKIKNNK FLTEFNPDDFMGRIEFDVKDDKGNLVIGAGKRLTVRKAKALIEGGLKLIEYPLELLMDRSTANTIYDPESGEVLFDALTN LDELKLKKLLDLGFESFDIANDLAVGIDASIINAFKADAESLKLLKQTEQIDDENDLAAIRIYKVMRPGEPVTKEAAKDF VKKLFFDPERYDLTKVGRMKMNHKLGVNVPEYVTTLTYEDVIKTVQYLVKVKSGHGHIDDRDHLGNRRIRAIGELLANEL HAGLIKMQKAIRDKMTTLSGTLEDLMPHDLVNSKMITSTITEFFTSGQLSQFMDQTNPLSEVTHKRRLSALGEGGLVKER AGFEVRDVHPTHYGRICPVETPEGQNIGLINTLSTFSKVNDLGFIEAPYKKVVDGVVTNEISYYTATQEEGLVIAPGSTK VDENGKIIEPLIEVRKNGEILLMERNSVDLIDISSQMVMGVAASLIPFLEHDDANRALMGSNMMRQAVPLLRPSAPVVGT GLEKIVARDAWEAIKANRAGLVEKADAKNIYIRGEDENGAFIDHYTVNKNVRTNNNTSFGQRIAVKEGDFVQKGQVIADG PSMDKGELAVGINAMVAFMPWNGYNYEDAIILSERLIEEDAFTSVHIYEKEIECRELKHGNEEITRDLPGVKEESISHLD NSGIVKVGTYITPGMILVGKVTPKGEIKPTPEERLLRAIFGEKAGHVINKSLVCPTSMEGTVVDVKVFTKKGYEKDDRAV AEIESEKAELDLKHHDKLLMLDREEILKINDLLLKATLTKDVELDDVVYKKGETIPVDVLNNVNRFAMKKVVSSYSKEIE KAYNDIKEYFIKQKAHLREEHEEKLQILEHDDILSSGVIKQVKVYIATKRKIKVGDKMAGRHGNKGIVSNIVPKVDMPYL EDGTTVDVILNPLGVPSRMNIGQILEVHLGLAGKKLGNQIQDIFEAKRADFIAELRAKMTEIASVAKLMNGKAFMDSLND EELVQYAQDWAKGVRFATQIFDGVKAEEFAKLFELAKIDSDGKCVLFDGKTGEKMKERVNVGYMYMLKLHHLVDEKVHAR STGPYSLVTQQPVGGKALFGGQRFGEMEVWALEAYGATNVLKEMLTTKSDDVEGRTKAYRAIANGENVPNSGVPETFFVL TKELKALALDVEIFGEVENNEQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00346 | YP_008207811.1 | DNA-directed RNA polymerase, beta subunit/140 kD subunit | Not tested | AbaR25 | Protein | 0.0 | 47 |
| BJAB0868_00350 | YP_008211676.1 | DNA-directed RNA polymerase, beta subunit/140 kD subunit | Not tested | AbaR26 | Protein | 0.0 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ABED_1705 | YP_005539232.1 | DNA-directed RNA polymerase subunit beta | CP000675.2.gene392.p | Protein | 0.0 | 48 |
| ABED_1705 | YP_005539232.1 | DNA-directed RNA polymerase subunit beta | NC_009085.4918494.p0 | Protein | 0.0 | 47 |
| ABED_1705 | YP_005539232.1 | DNA-directed RNA polymerase subunit beta | NC_010400.5987325.p0 | Protein | 0.0 | 47 |
| ABED_1705 | YP_005539232.1 | DNA-directed RNA polymerase subunit beta | NC_010611.6233925.p0 | Protein | 0.0 | 47 |
| ABED_1705 | YP_005539232.1 | DNA-directed RNA polymerase subunit beta | NC_011595.7060572.p0 | Protein | 0.0 | 47 |
| ABED_1705 | YP_005539232.1 | DNA-directed RNA polymerase subunit beta | NC_010410.6003841.p0 | Protein | 0.0 | 47 |
| ABED_1705 | YP_005539232.1 | DNA-directed RNA polymerase subunit beta | NC_011586.7046027.p0 | Protein | 0.0 | 47 |
| ABED_1705 | YP_005539232.1 | DNA-directed RNA polymerase subunit beta | NC_002516.2.881699.p | Protein | 0.0 | 47 |
| ABED_1705 | YP_005539232.1 | DNA-directed RNA polymerase subunit beta | CP001918.1.gene250.p | Protein | 0.0 | 46 |
| ABED_1705 | YP_005539232.1 | DNA-directed RNA polymerase subunit beta | NC_002695.1.914942.p | Protein | 0.0 | 46 |
| ABED_1705 | YP_005539232.1 | DNA-directed RNA polymerase subunit beta | CP000034.1.gene3741. | Protein | 0.0 | 46 |
| ABED_1705 | YP_005539232.1 | DNA-directed RNA polymerase subunit beta | CP001138.1.gene4362. | Protein | 0.0 | 46 |
| ABED_1705 | YP_005539232.1 | DNA-directed RNA polymerase subunit beta | CP000647.1.gene4402. | Protein | 0.0 | 46 |
| ABED_1705 | YP_005539232.1 | DNA-directed RNA polymerase subunit beta | CP004022.1.gene2794. | Protein | 0.0 | 46 |
| ABED_1705 | YP_005539232.1 | DNA-directed RNA polymerase subunit beta | NC_011035.1.6448762. | Protein | 0.0 | 46 |
| ABED_1705 | YP_005539232.1 | DNA-directed RNA polymerase subunit beta | NC_008702.1.4609796. | Protein | 0.0 | 46 |
| ABED_1705 | YP_005539232.1 | DNA-directed RNA polymerase subunit beta | CP002695.1.gene18.p0 | Protein | 0.0 | 46 |
