Gene Information

Name : YBT020_12990 (YBT020_12990)
Accession : YP_005566252.1
Strain : Bacillus thuringiensis YBT-020
Genome accession: NC_017200
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2561354 - 2562124 bp
Length : 771 bp
Strand : +
Note : COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence : 
ATGGAAATTTTACATGCAAAAAGTATTAGTAAAGTATATAAAGGGAAAGTACCTTATAAGGCATTAGTTGATATTGATTT
ATCAATTCAAGAAGGTGAATTTGTAGGGATTATGGGGCCATCTGGTAGTGGGAAAACAACGTTATTAAATATGGTATCTA
CTATTGATTCTCCATCATCTGGAGAAATTTTAATAAATGGCACAAATCCTTTCCAATTATCATCAGAAGATTTAGCGTTA
TTCCGCAGAAAACAATTAGGATTTGTTTTTCAATCATTTAATCTTCTTAGCACACTTACTGTAAAAGAAAACATCGTATT
GCCAATGACTTTAGATGGTGTTTCTGTGAAAGAAATGAACAAAAGAGTGGAAGAAATTGCAGAGAAATTAAACATTACAG
AAATATTAAGTAAAAGAACGTTTGAAATATCAGGGGGACAAGCTCAAAGAACGGCAATCGCACGTGCGATTGTTCATAAG
CCACAATTATTACTTGCTGACGAACCAACAGGGAATTTAGACTCTAAATCTTCAAATGATGTAATGGAGATGCTTGATAC
TCTTAATAAAGAAGAAAAAGCAACGATGATGTTAGTTACTCATGATCCGTATGCAGCGAGTTTTTGCAGCCGAGTAATCT
TTATTAAAGATGGTCAACTATATAACGAAATTTATTGCGGTGAAAGCAGGCAAGCGTTTTATCAAAAGATTATGGATGTC
CTTTCTTTGTTAGGAGGGAAAAGGCATGACTTTTCGTCAGTTCGCATTTAA

Protein sequence : 
MEILHAKSISKVYKGKVPYKALVDIDLSIQEGEFVGIMGPSGSGKTTLLNMVSTIDSPSSGEILINGTNPFQLSSEDLAL
FRRKQLGFVFQSFNLLSTLTVKENIVLPMTLDGVSVKEMNKRVEEIAEKLNITEILSKRTFEISGGQAQRTAIARAIVHK
PQLLLADEPTGNLDSKSSNDVMEMLDTLNKEEKATMMLVTHDPYAASFCSRVIFIKDGQLYNEIYCGESRQAFYQKIMDV
LSLLGGKRHDFSSVRI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-26 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YBT020_12990 YP_005566252.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 3e-40 46
YBT020_12990 YP_005566252.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 6e-41 45
YBT020_12990 YP_005566252.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 4e-39 43
YBT020_12990 YP_005566252.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 7e-36 42
YBT020_12990 YP_005566252.1 ABC transporter ATP-binding protein NC_012469.1.7686946. Protein 5e-29 41