Gene Information

Name : YBT020_04280 (YBT020_04280)
Accession : YP_005564520.1
Strain : Bacillus thuringiensis YBT-020
Genome accession: NC_017200
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 906581 - 907255 bp
Length : 675 bp
Strand : -
Note : COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence : 
GTGATTAACTTAAAAGGCATCACGAAATCCTTCCAAAATGGTGCAGAATCCGTTCAAATATTACACGGAATTGACGTAAC
ACTGAACCAAGGAGAATTCACTTCTATTATGGGACCATCTGGTTCTGGTAAATCAACTTTAATGAATATTATCGGTTGTT
TAGATAAACCAACGACAGGTACGTACGAACTAGCTGGACAAAACATTTCAAACATGTCTGAAACAGAACTTGCACGCGTT
CGTAATAAAGAGATCGGATTCGTATTCCAGAACTTTATGTTATTACCGAGACTTACAGCACTTCAAAATGTAGAGCTACC
TCTTATTTACGCTGGAGTTGATAAAAAGGAAAGACGTGAGCGCTCATTAGCCGCTTTAACAAAAGTGGGTTTAGCTGATC
GTGCTACTCACTTACCGAACGAATTATCAGGTGGACAAAAACAGCGTGTCGCTGTTGCACGTGCAATCGTAAATAATCCA
AAGTTCATTTTAGCCGATGAACCGACTGGAGCACTTGATACGAAAACAAGTACACAAATTATGGACCTCTTTTACGAATT
AAACAAACAAGGCTCAACAATCATTATGATTACCCATGATCGTGAAATCGGGGAAGCTGCAGCACGTCAAATTGTAATTC
GTGACGGAAATATCGTCCAAGATTGGAGAGGTTAA

Protein sequence : 
MINLKGITKSFQNGAESVQILHGIDVTLNQGEFTSIMGPSGSGKSTLMNIIGCLDKPTTGTYELAGQNISNMSETELARV
RNKEIGFVFQNFMLLPRLTALQNVELPLIYAGVDKKERRERSLAALTKVGLADRATHLPNELSGGQKQRVAVARAIVNNP
KFILADEPTGALDTKTSTQIMDLFYELNKQGSTIIMITHDREIGEAAARQIVIRDGNIVQDWRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-35 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YBT020_04280 YP_005564520.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-67 63
YBT020_04280 YP_005564520.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 5e-47 48
YBT020_04280 YP_005564520.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 6e-41 45
YBT020_04280 YP_005564520.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 2e-38 43