Gene Information

Name : BLIJ_1980 (BLIJ_1980)
Accession : YP_005585729.1
Strain : Bifidobacterium longum JCM 1222
Genome accession: NC_017219
Putative virulence/resistance : Resistance
Product : putative ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2089424 - 2090125 bp
Length : 702 bp
Strand : -
Note : -

DNA sequence : 
ATGTCGTTCATTGACGTCATCAATCTGACTAAACAATACAACAGCAATGACGTGCAGACTATGGCCTTGGATCATGTCAG
CTTCTCCCTCGACGAGGGTGATTTCTGTGTGGTCCTTGGGCAGAGCGGCGCGGGAAAGTCCACGCTGCTCAACATGTTGG
GCGGCATGGACTCACCCACATCAGGTTCCATCACAGTCGATGGCACTGATATATCCGACATGAGGGAACGCGCCTTGACA
CAGTATCGCCGCAACTCCATCGGCTTTGTGTTCCAATTCTATAACATCATCCCCAACCTCACCATTCTAGAAAATGTGGA
AATGGTCGCACGCTTCGGCGGAAAGAATTTCGATCCGCAAGCCGTCCTCTCCGACGTTGGTCTCGGCGAGAAAATCCATG
CCTTCCCACAAGAATTGTCCGGCGGCCAGCTCCAACGTGTGGCCATTGCGCGAGCCCTGTGCAAGAACCCGCAGCTGCTG
CTGTGCGACGAACCTACAGGCGCGTTGGATTCCAAAACCGGACAGTCGGTCCTAAAACTTCTGATGCGGATGTCTCGCCA
ATACCGCAAAACCGTGATTGTGGTAACGCATAATTCATCGATTGTGCGAATCGCCGATGTGGTCGTCACCATCAAAGACG
GCAAAACCGAATCCGTGCAGCGAAACAACAATCCGGAATCCATTACCCAAATCCAGTGGTAG

Protein sequence : 
MSFIDVINLTKQYNSNDVQTMALDHVSFSLDEGDFCVVLGQSGAGKSTLLNMLGGMDSPTSGSITVDGTDISDMRERALT
QYRRNSIGFVFQFYNIIPNLTILENVEMVARFGGKNFDPQAVLSDVGLGEKIHAFPQELSGGQLQRVAIARALCKNPQLL
LCDEPTGALDSKTGQSVLKLLMRMSRQYRKTVIVVTHNSSIVRIADVVVTIKDGKTESVQRNNNPESITQIQW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-30 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BLIJ_1980 YP_005585729.1 putative ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 3e-52 48
BLIJ_1980 YP_005585729.1 putative ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 9e-43 44
BLIJ_1980 YP_005585729.1 putative ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 8e-43 42
BLIJ_1980 YP_005585729.1 putative ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 3e-28 42
BLIJ_1980 YP_005585729.1 putative ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-37 41