Gene Information

Name : fecI (BPTD_1128)
Accession : YP_005589311.1
Strain : Bordetella pertussis CS
Genome accession: NC_017223
Putative virulence/resistance : Virulence
Product : ECF family RNA polymerase sigma factor
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1223165 - 1223698 bp
Length : 534 bp
Strand : +
Note : -

DNA sequence : 
GTGCCTGCCAGCCTGATCACTTCGCCCTCCGCCCGTCCCGCCGCCGACACCGCCGCGGTGGAGGGCCTGTACCGCCAGCA
CCGGTCGTGGCTGGCCGGGTGGCTGCGGCGGCGGCTGGGCTGTCCGCACCGCGCCGAGGATCTGACGCAGGATGTGTTCG
TGCGCGTGATCCAGGGGCGCAAGGCGGTACGCATGGAGCAGGCGCGCGCCTTGCTGGCCACCATCGCCAAGGGACTGGTC
ATCGATCACCAGCGCCGTGCGGCGCTGGAGCACGCTTATCTGGAATACCTGGCGGCGCAGCCGTCGGGGCACGCGCCTTC
GCCGCAACAGCAGGCCGAGCTGCTGCAGGCGCTGGTCGAGCTCGATCGCCTGCTCGAAGGCTTGCCGCCGCACGCCCGCG
CGGTGTTCCTGATGTCGCAGCTCGAAGGGCTGGGCTATGCCGAGATCGCGCAACGCCTGCGCATTTCGCTCAGTTCGGTG
CAGCAATACATGCTGCGCGCCATGAGCGCTTGTTACATGGCATTCCATGAGTAG

Protein sequence : 
MPASLITSPSARPAADTAAVEGLYRQHRSWLAGWLRRRLGCPHRAEDLTQDVFVRVIQGRKAVRMEQARALLATIAKGLV
IDHQRRAALEHAYLEYLAAQPSGHAPSPQQQAELLQALVELDRLLEGLPPHARAVFLMSQLEGLGYAEIAQRLRISLSSV
QQYMLRAMSACYMAFHE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08458.1 FecI Virulence SRL Protein 1e-23 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fecI YP_005589311.1 ECF family RNA polymerase sigma factor VFG1049 Protein 4e-24 43