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Name : glcD (BPTD_2874) Accession : YP_005590887.1 Strain : Bordetella pertussis CS Genome accession: NC_017223 Putative virulence/resistance : Unknown Product : glycolate oxidase subunit Function : - COG functional category : - COG ID : - EC number : - Position : 3122849 - 3124348 bp Length : 1500 bp Strand : - Note : - DNA sequence : ATGAACACCTTGGTGGATGCCGGTTTTTCGCCCAGGCGGGAAGGCTTTGCGCCTCAGCCGCTGATCGAGGCCTTGCTGTC GATACTGCCCGCGCATTGCGTGCTGCATCGCGAAGAGGACACACGCCCGTACGAGTGCGACGGCCTGTCGCTGTACCGGG CGCTGCCGGCGGTGGTGGCCCTGCCGGAAGACGAGGCGCAGGTGCGCGCCATCATGCAGCTGTGCAAGCGCATGAACGTG CCGATCGTGGCGCGCGGCGCGGGGACCGGTCTGTCGGGCGGGGCCATGCCGCACGCGCAGGGCGTGCTGCTGGGGCTGTC CAAGCTCAACCGTATCAAGCGCATAGACCCCGCCGGCGGCACGGCCGTGGTCGAGCCGGGCGTGCGCAACCTGGCCATTT CCGAAGCCGCCGCGCCTTACGGGCTTTACTACGCCCCGGACCCATCCAGCCAGATCGCCTGTTCGATCGGCGGCAACGTG GCCGAGAACTCCGGCGGCGTACATTGCCTCAAGTACGGGCTGACGGTACACAACGTGCTGCGCGTGCGTGTGGTGACCAT CGACGGGGAGATCGTCGAGCTCGGCTCGGAAGCGCCCGATGCGCCCGGCCTGGACCTGCTGTCGGTGTTCGTCGGCTCCG AAGGCATGCTGGGCGTGGTGACCGAAATCACGGTCAAGCTGATTCCCTCGCCGGCCTGCGCGCAAGTGGTCATGGCCAGC TTCGCCAGCGTCGAAGCGGCGGGCAACGCGGTCACGCAGATCATTGCCGCAGGCCTGATCCCGGCCGGGCTGGAGATGAT GGACCGCCAGGCGGTCCACATGGTCGAGCCCTTCGTGCAGGCGGGCTACGACCTCCAGGCGCAGGCCATCCTGCTGTGCG AGGCCGACGGCACGCCGCAGGAGGTGGCCCACGAGGTCGCCATGATGGAGGCGGTATTCAAGCGGGCCGGCGCGACGAGC CTGCAGGTATCGGGCTCGGAAGCCGAGCGCCTGCGCTTCTGGGCCGGCCGCAAGAATGCCTTTCCCGCCGCCGGCCGCGT GTCGCCCGACTACTATTGCATGGACGGCACGATTCCCCGGCGCCACCTGGCGCGCGTGCTTGGCGCCATCGAGCAGATGG AAGACGATTTCGGCCTGCGTTGCGCCAACGTGTTCCATGCCGGCGATGGCAATCTGCATCCCCTGATACTGTTTGATTCG AACAAGCCCGATGAGGTCGAGCGCGCCGAGAAGTTCGGCGCCGCCATTCTCGAGCTGTGCGTGCAGGTTGGAGGCACCGT GACCGGAGAGCACGGTGTGGGTATGGAGAAAATAAATCAAATGTGCGTGCAATTCTCGCGTGACGAACTCGATGCCTTCC TGGCGGTCAAGCGGGCGTTCGACCCGCCCGGCCTGCTCAACCCTGAAAAGGTCATACCCACGCTGGCACGCTGCGCCGAA TACGGCAAGATGCACGTGCATGCCGGCGAAATGAGATTTCCCGATCTGGCGCGCTTCTAG Protein sequence : MNTLVDAGFSPRREGFAPQPLIEALLSILPAHCVLHREEDTRPYECDGLSLYRALPAVVALPEDEAQVRAIMQLCKRMNV PIVARGAGTGLSGGAMPHAQGVLLGLSKLNRIKRIDPAGGTAVVEPGVRNLAISEAAAPYGLYYAPDPSSQIACSIGGNV AENSGGVHCLKYGLTVHNVLRVRVVTIDGEIVELGSEAPDAPGLDLLSVFVGSEGMLGVVTEITVKLIPSPACAQVVMAS FASVEAAGNAVTQIIAAGLIPAGLEMMDRQAVHMVEPFVQAGYDLQAQAILLCEADGTPQEVAHEVAMMEAVFKRAGATS LQVSGSEAERLRFWAGRKNAFPAAGRVSPDYYCMDGTIPRRHLARVLGAIEQMEDDFGLRCANVFHAGDGNLHPLILFDS NKPDEVERAEKFGAAILELCVQVGGTVTGEHGVGMEKINQMCVQFSRDELDAFLAVKRAFDPPGLLNPEKVIPTLARCAE YGKMHVHAGEMRFPDLARF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcD | CAE85245.1 | GlcD protein | Not tested | PAI V 536 | Protein | 6e-143 | 60 |
