Gene Information

Name : BJ6T_55670 (BJ6T_55670)
Accession : YP_005610410.1
Strain : Bradyrhizobium japonicum USDA 6
Genome accession: NC_017249
Putative virulence/resistance : Virulence
Product : transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5643978 - 5644547 bp
Length : 570 bp
Strand : +
Note : TetR family

DNA sequence :
ATGCCGGCCAGCGCCTACACCCGCGCCAAGCAGCCCGAGCAGGTCCGGCGCGCCCTGCTCGACCAGGCCGCGGCGATCGC
CGTGGATCACGGCGTCTCGGGGATCACGGTGCAGGCGGTGGCAGCGGCGGCCGGCGTCACCAAGGGCGGGCTGTTCCATC
ATTTCGGCAGCAAGCAGGCGCTGATCGAGGGCCTGTTCGCCGATCTCCTCGCCCGCGTCGATGCCGAGATCGACGCCGCT
ATCGAAGCGGACCCGAAGCCGCGCGGCAGCTTTACGCGGGCCTATGTCAATGCGGTCTTCACCGGCAAGGCCTTCGGCTT
TGCGACGCCCTGGGCGGCGCTGAGCATGGTCGTGGTCACCGATCCCTCCCTGCGCCGGCTCTGGAACGACTGGATGAAGG
CGCGCCTGAAGCGTCACGGTACGACCGACGCAGCGCCCGAACTCCACGTCGTACGCCTCGCCGCCGACGGCGCCTGGCTG
TCCTACATCACGACGGGACAGACGCGCATGGGCGCGGACTTGCGTGCCGTGCACGACCGCCTGATCGAACAGACCTATCG
GCGTGGATAG

Protein sequence :
MPASAYTRAKQPEQVRRALLDQAAAIAVDHGVSGITVQAVAAAAGVTKGGLFHHFGSKQALIEGLFADLLARVDAEIDAA
IEADPKPRGSFTRAYVNAVFTGKAFGFATPWAALSMVVVTDPSLRRLWNDWMKARLKRHGTTDAAPELHVVRLAADGAWL
SYITTGQTRMGADLRAVHDRLIEQTYRRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42082.1 hypothetical protein Not tested PAI II 536 Protein 7e-18 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BJ6T_55670 YP_005610410.1 transcriptional regulator VFG1601 Protein 3e-18 41