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Name : YPC_1879 (YPC_1879) Accession : YP_005623772.1 Strain : Yersinia pestis Harbin 35 Genome accession: NC_017265 Putative virulence/resistance : Virulence Product : type I secretion system ATPase Function : - COG functional category : - COG ID : - EC number : - Position : 1839659 - 1841443 bp Length : 1785 bp Strand : + Note : - DNA sequence : ATGGAAAATCATGTTCATTCCGCGCTGATATGTGCATCCAGACTGATTCGGTTGGCCGGGTTAAATCCAATGGATATCGA GACATTTAGCCAAAAGGTCGCCATAGACACCTCAGTAAAAACAACGCTAGCGTCTCTTCAGCGTTATATCGTTCAATTTT CACAAACAGCTTCTGTCCGTTTTAAAATACGTAAGCAAGCATTGGAAAAAATAAGGCAGGAGCAGTTACCGCTGGCATTT CGTGACCGTCAGGGGAATTTTATCTTGCTGGCGCGGATGAATGAACAACAAGTGTTATTACAGTACGCTGATGATAAAAA ACCACAAATGTTAAGTTATCAATCACTTGCTGACATGTGGGGTGGAATGATCTTATGCTGTAGTCATTCGCGCTTTGATA TTCGCTGGTTTATCCCGCCACTACGTCGCCATCGTAAGCCATTAATGCAAGTCCTATTGTTATCATTATTGCTGCAATTC CTAGCGTTGATCTCCCCTCTCTTTTTTCAAGTTATCATGGACAAAGTACTCGTTCATCATGCATTAACCACACTGGAAGT GCTAATCTTCATCTTAGTCATTGTCGGTGTGTATGAGGTTATATTAAAAGGCTTGCGAGAATATATTTTCACGCATACGA CAACACGAGTGGATATATTATTAGGCGGGAAGTTGTTTCAACATTTAATCAGGTTGCCGTTAAGTTACTTTAAACAACGT CATGTCGGTAATATTGTTGCCAGAGTCCGTGAGTTAGATAATATCCGTGATTTCATCACGGGTTCGGCCCTGACATTATG TGTTGATGTGGTTTTTACCCTCGTGTTGTTTATTGTTATGTGGTGTATATCCCCGTTATTAACCTTAATAATACTGAGCA CGTTGCCTTTTTATCTGTTATTGGCCGTGATGACCACTCGGCCGTTGCAAAAAAAAGTAGAAGCTCTCTGTGGTTTTGCC GCGCAAAACGGCGCGTTTTTGACTGAAACGGTGTCTGGGGTGGAAACCGTAAAAAGTTTGGCGCTGGAGCCACGGATGCG CCAGCGCTGGGAAAGCCAAACTCGTGATTTTGCTCAGGCTAATTTTCAGGTACAAAATTTGCAAAATCTCAGTAGCCAAG CGGCTCAACTCTTGCAAAAGGTGGCTGGCGCACTGGTGATCGTGATAGGTGCGTATCACGTTATGTCTGTACAGCTCAGT ATTGGTCAGTTGATTGCATTTAATATGTTGGCACTACAGGCATTAATGCCGATGAGTAAACTGGTTGATTTATGGCAGCA GAGCATCCGTGCTCAGGTTGGGCTGAAATTAATATCAGATATTCTAAGCTTGCCGGTTGAACCGGAGGCAGATCCGGCGG CCCCGCACCCTGCGATTAGCGGCAATATCCTACTAAAAAATGTGGCCTTCCGTTATCGCCCCGATCTTGATCCTGTCTTA CATGATTTAAACTTATCTATCCGCGCGGGTGAACATATCGGGTTGGTGGGGCCGTCAGGATCGGGGAAAAGCACCGTGGC CCGGTTATTACAACGGCTCTATAACACCGAACAAGGGGTCATTACGATAGATGGTTATCCGATCAACCATTTATCACCAG AATATTTACGGCGACAAGTGGGGGTGGTGATGCAGGAAAGCTATCTGTTTAACCGCACCGTGCGAGAAAATATTGCCCAT TCACGGCCAACAGCCACCTTGACCGAGGTGGTCAATGCCGCCAGTTTAGCGGGTGCTAACGCCTTTATTTTGGCGCTACG CGAATCCCCGGATCTTAATTTTTGA Protein sequence : MENHVHSALICASRLIRLAGLNPMDIETFSQKVAIDTSVKTTLASLQRYIVQFSQTASVRFKIRKQALEKIRQEQLPLAF RDRQGNFILLARMNEQQVLLQYADDKKPQMLSYQSLADMWGGMILCCSHSRFDIRWFIPPLRRHRKPLMQVLLLSLLLQF LALISPLFFQVIMDKVLVHHALTTLEVLIFILVIVGVYEVILKGLREYIFTHTTTRVDILLGGKLFQHLIRLPLSYFKQR HVGNIVARVRELDNIRDFITGSALTLCVDVVFTLVLFIVMWCISPLLTLIILSTLPFYLLLAVMTTRPLQKKVEALCGFA AQNGAFLTETVSGVETVKSLALEPRMRQRWESQTRDFAQANFQVQNLQNLSSQAAQLLQKVAGALVIVIGAYHVMSVQLS IGQLIAFNMLALQALMPMSKLVDLWQQSIRAQVGLKLISDILSLPVEPEADPAAPHPAISGNILLKNVAFRYRPDLDPVL HDLNLSIRAGEHIGLVGPSGSGKSTVARLLQRLYNTEQGVITIDGYPINHLSPEYLRRQVGVVMQESYLFNRTVRENIAH SRPTATLTEVVNAASLAGANAFILALRESPDLNF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hlyB | CAD33760.1 | hemolysin B | Virulence | PAI I 536 | Protein | 6e-85 | 42 |
| hlyB | CAD42038.1 | HlyB protein | Virulence | PAI II 536 | Protein | 6e-85 | 42 |
| hlyB | NP_755448.1 | hemolysin B | Virulence | PAI I CFT073 | Protein | 7e-85 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| YPC_1879 | YP_005623772.1 | type I secretion system ATPase | VFG1557 | Protein | 3e-85 | 42 |
| YPC_1879 | YP_005623772.1 | type I secretion system ATPase | VFG1501 | Protein | 3e-85 | 42 |
| YPC_1879 | YP_005623772.1 | type I secretion system ATPase | VFG0907 | Protein | 3e-85 | 42 |
| YPC_1879 | YP_005623772.1 | type I secretion system ATPase | VFG0841 | Protein | 6e-79 | 42 |
| YPC_1879 | YP_005623772.1 | type I secretion system ATPase | VFG1269 | Protein | 2e-87 | 41 |
