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Name : secD (YPC_3476) Accession : YP_005625234.1 Strain : Yersinia pestis Harbin 35 Genome accession: NC_017265 Putative virulence/resistance : Unknown Product : SecYEG protein translocase auxillary subunit Function : - COG functional category : - COG ID : - EC number : - Position : 3341924 - 3343771 bp Length : 1848 bp Strand : - Note : - DNA sequence : GTGTTAAACCGTTATCCTTTGTGGAAGTATCTGATGCTGATCGTTGTGATCTTCGTCGGTCTGCTATATGCGCTTCCCAA CCTTTATGGTGAGGATCCGGCTGTTCAAATCACTGGTGCGCGAGGAATCGCCGCCAGTGAGACAACGCTGGTCCAAGTCC GTGACGTTTTAGAAAAAGACAACATAGCGAGCAAGTCTATTGCGCTGGAAAACGGTGCAATCCTGGCTCGCTTTAGAGAT CCTGATGTCCAGCTACGTGCTCGCGAAGCACTGGTGGAGGCGTTGGGTGATAAATATGTTATCGCGCTGAACCTGGCTCC GGCAACACCTTCCTGGCTTGCCAAATTGGGTGCAGAACCCATGAAATTAGGTCTTGACCTGCGAGGTGGTGTTCATTTCC TGATGGAAGTGGATATGGATACCGCGCTGGGCAAACTGCAAGAGCAAACGATGGATACCTTACGCACTGATTTGCGTGAG AAAAATATCCCGTATGCCACAGTACGTAAGCTCGATAACTATGGTGTTGAAGTGCGTTTTCGCGATGATAAAGCGCGCAA TGATGCTATCAGCTACCTCTCTTCGCGCCATCGTGATTTGGTGTTCAGCTCCAATGGCAGCAACACGCTAAAAGCGGTGA TGAGTGATGAGCGTTTGCGGGAAGCTCGGGAATATGCGGTTCAACAAAATATTACAATTCTGCGTAACCGAGTTAACCAG CTAGGTGTTGCAGAGCCGTTAGTCCAACGGCAGGGTTCTGACCGTATTGTTGTTGAACTACCGGGTATTCAAGACACCGC GCGTGCTAAAGAGATTCTGGGTGCGACTGCAACGTTGGAATTCCGTTTAGTCAACACTAACGTTGATGCTTCTGTCGCAG CTTCTGGCCGTGTACCTGGCGATTCGGAAGTGAAAAATACCCGTGAAGGCCGCCCGGTTGTCTTGTACAAACGAGTGATC TTGACCGGTGACCATATTACTGATTCAACCTCCAGTACCGACGAGTATAACCAGGCTCAGGTTAATATCTCGCTCGATAG TGCAGGGGGGGCGACGATGTCTAATTTTACTAAAGACAATATCGGCAAGCCGATGGCGACTTTATTCGTAGAATATAAAG ACAGCGGTAAAAAAGATGCGAATGGCCGGTCTATTCTGGTTAAACAAGAAGAAGTTATCAATGTGGCGACCATCCAGTCG CGTTTAGGTAACAGTTTCCGCATTACCGGCATTGATAACCCAGCTGAAGCGCGGCAACTTTCCCTGTTACTGCGTGCTGG TGCGTTGATTGCACCTATCCAGATTGTGGAAGAGCGTACTATTGGGCCAACGTTGGGTTCCCAGAATATTGCGCAAGGCT TAGAAGCCTGCTTATGGGGTCTGGCTGTATCGATCCTGTTTATGGTGGTTTACTACCGTAAGTTTGGTGTGATTGCCAGT ACTGCACTGATGGCCAACCTGGTGTTAATCGTCGGCGTGATGTCCTTATTACCGGGGGCGACATTAACCATGCCGGGTAT TGCCGGGATTGTATTGACGCTAGCGGTAGCAGTAGATGCTAACGTACTGATTAACGAGCGAATAAAAGAAGAGTATAGAA ACGGGCGGACGATCCAGCAAGCGATTCATGAAGGGTACAAGGGTGCCTTCTCAAGTATCGTCGATGCGAACATAACGACG CTTATCACAGCCATTATTCTTTATGCTGTGGGTACTGGTTCGATTAAAGGCTTTGCTATTACAACGGCAATTGGTGTTGT AACGTCAATGTTCACCGCAATAGTCGGTACTCGTGCCATCGTCAACCTGCTTTACGGCGGCAAGCGCATTAACAAGCTGT CTATTTGA Protein sequence : MLNRYPLWKYLMLIVVIFVGLLYALPNLYGEDPAVQITGARGIAASETTLVQVRDVLEKDNIASKSIALENGAILARFRD PDVQLRAREALVEALGDKYVIALNLAPATPSWLAKLGAEPMKLGLDLRGGVHFLMEVDMDTALGKLQEQTMDTLRTDLRE KNIPYATVRKLDNYGVEVRFRDDKARNDAISYLSSRHRDLVFSSNGSNTLKAVMSDERLREAREYAVQQNITILRNRVNQ LGVAEPLVQRQGSDRIVVELPGIQDTARAKEILGATATLEFRLVNTNVDASVAASGRVPGDSEVKNTREGRPVVLYKRVI LTGDHITDSTSSTDEYNQAQVNISLDSAGGATMSNFTKDNIGKPMATLFVEYKDSGKKDANGRSILVKQEEVINVATIQS RLGNSFRITGIDNPAEARQLSLLLRAGALIAPIQIVEERTIGPTLGSQNIAQGLEACLWGLAVSILFMVVYYRKFGVIAS TALMANLVLIVGVMSLLPGATLTMPGIAGIVLTLAVAVDANVLINERIKEEYRNGRTIQQAIHEGYKGAFSSIVDANITT LITAIILYAVGTGSIKGFAITTAIGVVTSMFTAIVGTRAIVNLLYGGKRINKLSI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 8e-122 | 48 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 4e-122 | 48 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 4e-122 | 48 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 4e-122 | 48 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 2e-122 | 48 |
