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Name : secD (XOC_1961) Accession : YP_005628280.1 Strain : Xanthomonas oryzae BLS256 Genome accession: NC_017267 Putative virulence/resistance : Unknown Product : protein-export membrane protein SecD Function : - COG functional category : - COG ID : - EC number : - Position : 1935761 - 1937605 bp Length : 1845 bp Strand : + Note : - DNA sequence : ATGCTCGAATTTCCTCGCTGGAAGTACTTCCTGATCCTGCTGGTGCTGGCGGTCAGTGCGCTGTATGCGCTGCCCAACAT CTATCAGAAGGACCCGTCCGTGCAGATCACCGCCAGCCGCGGTGCGCAGCTCGACGACGCCTTGCGCAGTCGCATCGACG CCGACCTCAAGGCTGCCGGCATCACGCCCAAGGCAGTCACCAAGGAAGGCGACAGTCTGATGGTGCGCCTGCCCTCGCTG CAGGCGCAGACCCGCGCCAACGACGTATTGCGTCAGCAGCTGGGCGAAAACTACACCGTGGCGCTGAACCTGGCCTCCAC CGTACCGGACTGGCTGGCCAAGCTCGGCGGCCGGCCGATGGTGCTGGGTCTGGACCTGGTGGGCGGTGTGCACTTCGCCA TGCAGGTCGATCAGAAGGCCGCGCTGGAAAAGCGTCTGGACGGTTTCGCCGAAGACATCCGCACCACCTTGCGCGATGCC CGCATCGCCTATCGCTCGGTGGAGCGTCGCGCGGATAACAGCATCCAGGTCAGCCTGGGCGAGGGTGCCGACGCCGATGC CGCGCGCGTGGCGCTGGCCAAGGCGCAGCCGACCCTGACCTACGACGTCAGCGGCCAGAACATTGCGGTCAAGGTGCCGG AGGCCGAGCTCAAGCAGATCGCCAGCGGTGCGATCGAGCAGAACCTCACCACCTTGCGTAACCGCGTCAATGCACTGGGC GTGTCCGAGCCGACCATCCAGCGCCAGGGCGAAGACCGCATCGTGGTCGAACTGCCGGGCTTGCAGGACACCGCCGAAGC CAAGCGCCTGATCGGTGCCACCGCGTCGCTGGAATTCCGCGCCGTGGTCGACGGTAACGCCGAAGATGCCGTGCGCAGCG GCAACATCCCGCCGGAGGCCAAGGTCTATCGCGTGCGCGATACCGGCGCGCCGGTGCTGCTCAACAAGCGCGCGTTGGTG ACCGGCGACCAGATGGTCAGCGCATCGGTCAGCAACGACCAGAACGGCATGCCGGCGGTTGCGGTGACGCTCAACAACGT CGCCGGCCAGCGCATGTTCGACTACACCAGCGCCAACGTCGGCAAGCTGATGTCGGTGGTCTATATCGAGCGTATTCCCA CCGTGACCATGGTCGATGGCAAGGAAGTGCGTAGCGTGCGGGTGAAGGAAGAAGCGTTGCCTGCTACACGCATCGCTGGT GTGTTTGGCAAGAACTTCCAGACCACCGGTTTGGAAAAGACCGAAGCCGAAAATCTGGCCAAGCTGCTGAAATCCGGCTC GCTGGCCGCGCCGATGGATTTCGTCGAGGAATACGTCATCGGCCCGAGCCTGGGTGCGGAGAACGTGGAGCGCGGCGTCA CCGCGGTTGTCTACTCGTTCCTGTTCACGCTGGTGTTCTTCACCATCTACTACCGCGTGTTCGGCGCGATCACCTCGGTG GCGCTGCTGTTCAACCTGTTGATCGTGGTGGCGGTGATGTCGCTGTTCGGTGCCACCATGACGTTGCCGGGCTTTGCCGG CCTTGCCCTGTCGGTGGGTCTGTCGGTGGACGCCAACGTGCTGATCAACGAGCGTATTCGTGAAGAGTTGCGCCTGGGCG TGCCGCCCAAATCGGCGATTGCGGCCGGTTATGAAAAGGCCGGCGGTACCATTCTCGACGCCAACCTCACCGGCCTGATC GTGGCGGTGGCCCTGTATGCGTTCGGCACCGGCCCGCTCAAGGGCTTCGCGCTGACCATGATGATCGGTATTTTCGCCTC GATGTTCACTGCGATCACGGTCTCGCGTGCGCTGGCGGTGTTGATCTACGGCAGCCGCAAGAAGCTGAAGTCTGTCGCTA TCTGA Protein sequence : MLEFPRWKYFLILLVLAVSALYALPNIYQKDPSVQITASRGAQLDDALRSRIDADLKAAGITPKAVTKEGDSLMVRLPSL QAQTRANDVLRQQLGENYTVALNLASTVPDWLAKLGGRPMVLGLDLVGGVHFAMQVDQKAALEKRLDGFAEDIRTTLRDA RIAYRSVERRADNSIQVSLGEGADADAARVALAKAQPTLTYDVSGQNIAVKVPEAELKQIASGAIEQNLTTLRNRVNALG VSEPTIQRQGEDRIVVELPGLQDTAEAKRLIGATASLEFRAVVDGNAEDAVRSGNIPPEAKVYRVRDTGAPVLLNKRALV TGDQMVSASVSNDQNGMPAVAVTLNNVAGQRMFDYTSANVGKLMSVVYIERIPTVTMVDGKEVRSVRVKEEALPATRIAG VFGKNFQTTGLEKTEAENLAKLLKSGSLAAPMDFVEEYVIGPSLGAENVERGVTAVVYSFLFTLVFFTIYYRVFGAITSV ALLFNLLIVVAVMSLFGATMTLPGFAGLALSVGLSVDANVLINERIREELRLGVPPKSAIAAGYEKAGGTILDANLTGLI VAVALYAFGTGPLKGFALTMMIGIFASMFTAITVSRALAVLIYGSRKKLKSVAI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 1e-104 | 45 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 1e-104 | 45 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 1e-104 | 45 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 1e-104 | 45 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 2e-104 | 45 |
