Gene Information

Name : VCLMA_B0047 (VCLMA_B0047)
Accession : YP_005631940.1
Strain :
Genome accession: NC_017269
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 59864 - 60817 bp
Length : 954 bp
Strand : +
Note : -

DNA sequence : 
ATGCAGACCACGCCACTCAAAATTGGGATCAGTGCTTGTCTACTTGGAGCGAAAGTACGCTTCGATGGCGGGCATAAAAT
TAGCCATTTCGTGACCAATGAGCTCGATCGTTACGCGGAGTTTGTTTCTGTTTGTCCAGAAATGGGAATGGGGCTACCTG
TCCCTCGTCCCACATTACGACTTATCTCGGAAAATGAACGGATTGCGTTGGTGGAAACCAAAGATAGCTCGCGCGATCAC
ACCGCAGCGTTAGAGAGTTACTCACAGCAGAAAGTTGCTGAGTTACAACATGCTGAGTTGTGTGGCTACATCGTCTGCGC
AAAATCACCCAGTTGTGGTATGGAGCGTGTCAAAGTCTACAAGCACAATGGTACCGAAAAAGACGGTGTTGGCGTCTATA
CCCGAATTTTGATGGAGAAAATGCCGTGGCTACCGATTGAAGAAGATGGTCGATTGAATGATCCGGTCTTGCGGGAAAAT
TACATCACCCGAGTTTTCTGTTTGCATGATTTTTACACCAGCATGGGCGATGCGCCGAGCGCGAAAAAAATCGTCGAATT
TCACTCTCGCTACAAATTAACCCTGATGGCACATAACCCACAGGCGTATCGCGCGTTAGGCCGCTTAGTGGCGAATGTGA
AACAGTATCCACTGGATTCTTTTATCCAAGAGTACCGTTTAGGGTTGATGCAAGCTCTGGCTCACCGTGCTAGCCGCAAA
AATAACACGAATGTGCTGATGCATTTGCAAGGTTATTTCAAGCGCTCGCTGAACAAATTACAAAAAGCCGAACTGGCTCA
AGTGATCGAGAGCTATCGGGTGGGGGAGCTGCCACTGTTAGCGCCCATCACGCTACTCAAACATTATCTCGCTCTGTTTC
CTGATGCTTATCTCGCTCAGCAGCGCTACCTAAACCCTTATCCTCAGGAGTTGAAACTACGTTATGGTTTGTGA

Protein sequence : 
MQTTPLKIGISACLLGAKVRFDGGHKISHFVTNELDRYAEFVSVCPEMGMGLPVPRPTLRLISENERIALVETKDSSRDH
TAALESYSQQKVAELQHAELCGYIVCAKSPSCGMERVKVYKHNGTEKDGVGVYTRILMEKMPWLPIEEDGRLNDPVLREN
YITRVFCLHDFYTSMGDAPSAKKIVEFHSRYKLTLMAHNPQAYRALGRLVANVKQYPLDSFIQEYRLGLMQALAHRASRK
NNTNVLMHLQGYFKRSLNKLQKAELAQVIESYRVGELPLLAPITLLKHYLALFPDAYLAQQRYLNPYPQELKLRYGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf319 NP_460354.1 inner membrane protein Not tested SPI-2 Protein 3e-78 51
SC1410 YP_216397.1 inner membrane protein Not tested SPI-2 Protein 2e-78 51
ORF 319 CAB37410.1 - Not tested SPI-2 Protein 2e-78 51
STY1731 NP_456139.1 putative pathogenicity island protein Not tested SPI-2 Protein 5e-78 51
t1257 NP_805060.1 pathogenicity island protein Not tested SPI-2 Protein 5e-78 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VCLMA_B0047 YP_005631940.1 hypothetical protein VFG0490 Protein 1e-78 51