Gene Information

Name : VCLMA_B0096 (VCLMA_B0096)
Accession : YP_005631987.1
Strain :
Genome accession: NC_017269
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 114771 - 116246 bp
Length : 1476 bp
Strand : +
Note : -

DNA sequence :
ATGTCTACGACTGAAAAGGTATTGGAAAGGCCACAGCTTGCTCAAGGCAGCCTTCTTGATGAAATTATGGCGCAAACCCG
TATCGCACCAAGCGAAGAGGGTTACGACATCGCGAAAAAAGGTGTTGCAGCGTTTATCGAAAATCTTATGGGTTCACAAC
ACTCTGCTGAGCCTGTCAACAAATCTCTGGTTGACCAAATGTTGGTTGAACTGGATAAAAAAATCAGTGCACAGATGGAT
GAAATCCTGCACAACTCACAATTCCAAGCGATGGAATCGGCGTGGCGCGGTTTGAAGCTGTTCGTGGATCGCACTGATTT
TCGTGAAAATAACAAAGTCGAAATCCTTCACGTAACCAAAGATGAACTGCTGGAAGATTTCGAGTTTGCTCCAGAAACGG
CTCAGTCCGGTCTTTACAAGCACGTTTATTCTGCCGGTTATGGTCAATTTGGTGGCGAACCTGTTGGCGCGATCATTGGT
AACTATGCGTTTACCCCTTCAACGCCAGATATGAAGCTGCTGCAATACATGGGCGCACTGGGTGCCATGGCGCATGCTCC
TTTCATTTCAAGCGTAGGTCCTGAATTCTTTGGTATCGACTCCTTCGAAGAACTGCCTAACATTAAAGATCTCAAGTCGA
CATTTGAAAGCCCGAAATACACCAAATGGCGTTCACTGCGTGAATCGGAAGATGCGCGCTATCTTGGTTTGACTGCGCCT
CGTTTCCTGCTGCGTGTTCCTTACGATCCAATCGAAAATCCAGTGAAGTCGTTCAATTATGCGGAAAACGTCAGTGCTTC
GCACGAGCACTACCTGTGGGGTAACACGGCATTTGCCTTCGCAACTCGTTTGACGGATAGCTTTGCTAAATATCGCTGGT
GTCCAAACATTATCGGTCCACAAAGTGGTGGTGCAGTTGAAGATCTGCCGGTGCATGTCTTTGAATCTATGGGTGCATTG
CAAAGCAAGATCCCAACCGAAGTCCTGATCACGGACCGTAAAGAGTTTGAACTGGCGGAAGAAGGTTTTATTGCTCTTAC
TATGCGTAAAGGCAGTGATAACGCGGCGTTCTTCTCTGCAAACTCCATTCAAAAACCTAAGGTTTTCCCAAATACCAAAG
AAGGCAAAGAAGCGGAAACCAACTACAAGTTGGGTACCCAGTTGCCGTACATGATGATCATCAACCGTTTGGCGCACTAT
GTGAAAGTTCTGCAACGTGAGCAGATCGGTGCTTGGAAAGAGCGTCAAGATCTTGAGCGTGAACTGAACTCATGGATCAA
ACAATACGTTGCTGATCAAGAGAACCCACCTGCAGACGTACGTAGCCGTCGTCCACTTCGTGCTGCGCGCATTGAAGTGA
TGGATGTGGAAGGCAATCCAGGTTGGTATCAGGTGTCGCTCTCGGTTCGTCCTCACTTTAAGTACATGGGTGCGAACTTT
GAGTTGTCATTAGTTGGACGTCTTGATCAAGCCTGA

Protein sequence :
MSTTEKVLERPQLAQGSLLDEIMAQTRIAPSEEGYDIAKKGVAAFIENLMGSQHSAEPVNKSLVDQMLVELDKKISAQMD
EILHNSQFQAMESAWRGLKLFVDRTDFRENNKVEILHVTKDELLEDFEFAPETAQSGLYKHVYSAGYGQFGGEPVGAIIG
NYAFTPSTPDMKLLQYMGALGAMAHAPFISSVGPEFFGIDSFEELPNIKDLKSTFESPKYTKWRSLRESEDARYLGLTAP
RFLLRVPYDPIENPVKSFNYAENVSASHEHYLWGNTAFAFATRLTDSFAKYRWCPNIIGPQSGGAVEDLPVHVFESMGAL
QSKIPTEVLITDRKEFELAEEGFIALTMRKGSDNAAFFSANSIQKPKVFPNTKEGKEAETNYKLGTQLPYMMIINRLAHY
VKVLQREQIGAWKERQDLERELNSWIKQYVADQENPPADVRSRRPLRAARIEVMDVEGNPGWYQVSLSVRPHFKYMGANF
ELSLVGRLDQA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec18 YP_851426.1 hypothetical protein Not tested PAI II APEC-O1 Protein 3e-178 70
aec18 AAQ96712.1 Aec18 Not tested AGI-1 Protein 2e-178 70
HH0247 NP_859778.1 hypothetical protein Not tested HHGI1 Protein 2e-157 61

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VCLMA_B0096 YP_005631987.1 hypothetical protein VFG2093 Protein 0.0 100
VCLMA_B0096 YP_005631987.1 hypothetical protein VFG2475 Protein 6e-166 62
VCLMA_B0096 YP_005631987.1 hypothetical protein VFG2070 Protein 1e-86 42