Gene Information

Name : VCLMA_A1272 (VCLMA_A1272)
Accession : YP_005633909.1
Strain :
Genome accession: NC_017270
Putative virulence/resistance : Virulence
Product : Toxin secretion transporter, putative
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1439119 - 1441284 bp
Length : 2166 bp
Strand : -
Note : -

DNA sequence :
ATGAACACCCCGTTTACAACCGACGCTCACAGGGATGCTGAACAAACGTTACCACAAGAGTCTCCAAGCAATAATTGGGG
TATCGAAGCTGTGGTCTACGCAGGTCAGCAATTTCACAAAAAATCGACCAGCTCGCAACTGAAACACGCGCTAGGGGTAA
GCCACGCCAATCTCACTGACATGGAAATGAGAGAGGCCGCCGACTATCTTGGCCTGAAAAGCCAAATAACAAAGCTCAGT
ATTCAAGCGTTCAATACGCTGCCACTCCCCGCTCTTATCGAATATCAGGGTGGCTGGAAAGTGATGATCCAAACCGATGA
TAACGGTTGGACGGCCTACGATCCTGCAACCGACTCTCTGCACACACTCTCGTTCACATCGGCTGAATCCACCGCGCATT
ACAAAGTCATGCTGATTGCAGATGAGTCTCTGAGTGTCAAAGAGGTCAAATTTGGTTTAAGCTGGTTCGCCCCTTCCATT
CTTCGTCAAAAAAGCCAACTGCGAGATGTGTTTCTTTACGCCATCGCGCTACAGATATTTGCGCTGGTTAGCCCGATGCT
GTTTGAAAATGTTATCGATAAAGTGCTCGTGGGACGAAGCCTATCAAGCTTGCATGTGCTGGCGCTGGCGATGTTAGCGT
TAGCGATAGCTGAGCCAGCATACAGCTATTTACGCAATACCGTATTTGGCCATCTTGCAAGCCAAGTGAATGCCGAGCTG
TCAGGCCGACTCTATCGGCACTTAGTCGGTCTGCCATTAACCTATTTCAAGCAGCGCCAAACTGGGCAAATTATTGCGCG
AGTGCGTGAAATGGCGCAAATCCGTCAGTTTCTGACGGGTTCGACTTTGATGCTATTACTTGATCTGATTTTTGTGACGG
TTTTTCTCGCTGTCATGTTCCATTACGCCAGTACACTGACTTGGTTAGTGATTGGCTCGCTTGTGATTTATTTTGTGTTG
TGGCTGATTGCAGGACCGCTGATCCGCAAAAAAGTGGAATCTGAATACGAGTCCGACGCTAATGCCACGACATTTTTGAC
CGAAGCCGTTACCGGTATTGAAACCATCAAAACGACCGCAACGGAGCATCGCTTTCTCGAGCAGTGGCAACGCATTCTTA
GCCAGCAGCTAAACCGTGGCTTTGATGCACAAAAATCGGGGTTAATCGCTGGGCAAGCTATCGCTCTGGTGCAAAAGCTG
ACGGCGGCACTGCTGCTTTGGTGGGGCGTGAGCGCGGTACTCAAAGGTGAAATCACTCCCGGTCAGTTAGTGGCCTTCAA
TATGCTCGCCGGCCATGTGACTCAGCCAGTCCTGCGACTGGCACAAATTTGGCAGGATTTTCAGCACACTCTTATCGCAC
TGAGACGGGTTGGCGATATTCTCGATGAACCGAGAGAAAACAGTAAACAAGGCTTAGCGTCCGTGCCCGAACTCGATGGT
GGCATTGAGTTTAGTAACATTCGCTTTCGTTACCACCAAGATGCCCCTGAGGTACTGGCCAATCTATCACTCAAGATCAA
ACCGGGGCAATTTATCGGCGTTACTGGACCATCAGGTTCAGGCAAGAGCACACTCACTCGCCTGCTGCAACGCTTGTACG
TTCCGCAACATGGTCAAGTGCTGGTGGACGGAATGGATCTTGCGATTGCGGATCCCGTGTCTCTGCGCCGCAATATGAGT
GTGGTACTACAAGAGAGCATTCTTTTTTCCGGAAGTGTGGCGGACAATATTCGTTTATGTAAACCGCAGGCCAGCGATGA
AGAAATCCGTCATGCCGCTCAATTAGCAGGTGCGTTAGCATTTATTGAAGGACTTCCCCACGGTTTTAACCAACCGGTTG
GGGAAAAAGGTGCAGCGCTTTCGGGAGGTCAAAGGCAACGTATCGCCTTAGCGAGAGCCTTGCTGGTCAATCCTAGAATC
TTACTGCTGGATGAAGCGACCTCTGCTCTCGACTACAATTCTGAAGCGGCAATCATGAGCAATATGGATGAAATATGTCG
TGGTCGTACTGTGATCAGTATTGCCCATCGCCTCAATACCATCCGCCATGCTGACAACATCTTTGTATTGGATAAAGGAC
ATGTCGCCGAAAGCGGTACACATGAGGAACTGCTTGCCCAGCAAGGGCTGTACGCCAAACTTTGGACGCAACAAGTGGGA
GAATAG

Protein sequence :
MNTPFTTDAHRDAEQTLPQESPSNNWGIEAVVYAGQQFHKKSTSSQLKHALGVSHANLTDMEMREAADYLGLKSQITKLS
IQAFNTLPLPALIEYQGGWKVMIQTDDNGWTAYDPATDSLHTLSFTSAESTAHYKVMLIADESLSVKEVKFGLSWFAPSI
LRQKSQLRDVFLYAIALQIFALVSPMLFENVIDKVLVGRSLSSLHVLALAMLALAIAEPAYSYLRNTVFGHLASQVNAEL
SGRLYRHLVGLPLTYFKQRQTGQIIARVREMAQIRQFLTGSTLMLLLDLIFVTVFLAVMFHYASTLTWLVIGSLVIYFVL
WLIAGPLIRKKVESEYESDANATTFLTEAVTGIETIKTTATEHRFLEQWQRILSQQLNRGFDAQKSGLIAGQAIALVQKL
TAALLLWWGVSAVLKGEITPGQLVAFNMLAGHVTQPVLRLAQIWQDFQHTLIALRRVGDILDEPRENSKQGLASVPELDG
GIEFSNIRFRYHQDAPEVLANLSLKIKPGQFIGVTGPSGSGKSTLTRLLQRLYVPQHGQVLVDGMDLAIADPVSLRRNMS
VVLQESILFSGSVADNIRLCKPQASDEEIRHAAQLAGALAFIEGLPHGFNQPVGEKGAALSGGQRQRIALARALLVNPRI
LLLDEATSALDYNSEAAIMSNMDEICRGRTVISIAHRLNTIRHADNIFVLDKGHVAESGTHEELLAQQGLYAKLWTQQVG
E

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hlyB NP_755448.1 hemolysin B Virulence PAI I CFT073 Protein 1e-129 44
hlyB CAD33760.1 hemolysin B Virulence PAI I 536 Protein 8e-130 44
hlyB CAD42038.1 HlyB protein Virulence PAI II 536 Protein 8e-130 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VCLMA_A1272 YP_005633909.1 Toxin secretion transporter, putative VFG1269 Protein 2e-131 48
VCLMA_A1272 YP_005633909.1 Toxin secretion transporter, putative VFG0907 Protein 4e-130 44
VCLMA_A1272 YP_005633909.1 Toxin secretion transporter, putative VFG1557 Protein 4e-130 44
VCLMA_A1272 YP_005633909.1 Toxin secretion transporter, putative VFG1501 Protein 4e-130 44
VCLMA_A1272 YP_005633909.1 Toxin secretion transporter, putative VFG0841 Protein 6e-128 43