Gene Information

Name : VCLMA_A1793 (VCLMA_A1793)
Accession : YP_005634394.1
Strain :
Genome accession: NC_017270
Putative virulence/resistance : Virulence
Product : Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2046536 - 2047288 bp
Length : 753 bp
Strand : -
Note : -

DNA sequence :
ATGTGGAAATGGCTTCATCCCTATGCCAAACCTGATGCCGCTTACCAGCTGTGTGGTAAGTTGTTGCCTTGGTTTGCCAG
TTTAGGATTCCTGTTTCTTGCGGTAGGAACGGTGCTCGGTTTGGCCTATGCACCTGCGGATTACCAACAAGGGGACAGTT
TTCGAATCATCTATATCCATGTTCCCGCAGCGATATGGTCGATGGGCGTTTACATGTCGATGGCCATCGCCGCATTTATC
GGGATAGTCTGGCAACTGCGCATTTCGGATATGGCCGCGTTAGCCATGGCACCCATCGGCGCGGTGTACACCTTTATTGC
CCTTATCACGGGTGCTATTTGGGGCAAACCGATGTGGGGAGCATGGTGGGTGTGGGATGCGCGTCTCACCTCTGAGCTTG
TTCTGCTGTTTCTCTATTTAGGGGTTATTGCGCTTTATCATGCGTTTGATGACCAAAAAACTGCGGCAAAAGCGGCGGGT
ATATTAGCCATCGTCGGAGTGATTAACCTGCCTATCATTCACTTCTCCGTTGAGTGGTGGAACACCTTGCACCAAGGTGC
CACGATCACTAAGTTTGCCAAACCATCGATCGCACCAGAAATGTTATGGCCACTGCTCGCTTGTATCTTGGGTTTTGCGT
TCTTTTTTGCCGCATTGACCATGATCCGCTTACGCAATGAAATTTTGAGCCGAGAAAGCCACCGTCCTTGGGTGAGTGAG
CTTGCCAACCAAACCTTGCGAGGAAATCGGTAA

Protein sequence :
MWKWLHPYAKPDAAYQLCGKLLPWFASLGFLFLAVGTVLGLAYAPADYQQGDSFRIIYIHVPAAIWSMGVYMSMAIAAFI
GIVWQLRISDMAALAMAPIGAVYTFIALITGAIWGKPMWGAWWVWDARLTSELVLLFLYLGVIALYHAFDDQKTAAKAAG
ILAIVGVINLPIIHFSVEWWNTLHQGATITKFAKPSIAPEMLWPLLACILGFAFFFAALTMIRLRNEILSRESHRPWVSE
LANQTLRGNR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ccmC AAN62109.1 putative heme exporter protein C Not tested PAGI-2(C) Protein 4e-47 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VCLMA_A1793 YP_005634394.1 Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE VFG1856 Protein 1e-49 52