Gene Information

Name : XCR_3964 (XCR_3964)
Accession : YP_005638941.1
Strain : Xanthomonas campestris 756C
Genome accession: NC_017271
Putative virulence/resistance : Virulence
Product : RNA polymerase sigma factor
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4249672 - 4250181 bp
Length : 510 bp
Strand : -
Note : -

DNA sequence :

GTGTCGGCCACGCAAGTCGCGCTTCAGCAGCAGGTGGAGCGCCTGTACACCGACCACCACGGCTGGCTGCAGGGCTGGTT
GCGGCGCAAGCTGGGCGACGGGTGCGTGGCGGCCGACCTGGCCCAGGACACCTTCATCAGCGTGATCGATGCCGGTGCGG
CCGACCAGATCCGCGAGCCGCGGCCGTTCCTGGCCACCATCGCGCGGCGGCTGATGGCGCACCGCCAGCGGCGCAAGCTG
CTGGAGGCCAGCTACCTGGAGATGCTGGCCGCGTTGCCGGAAGAGCTGGCGCCTTCGCCGGAGTTGCACCTGCTGGCGCT
GGAGGCGGTGCAGCAGCTGGACCAGGCGCTGGACGGCCTGCCGCCGAAAGTGAAGGAGGCCTTCCTGCTGGCGCACCTGC
ACGAGCTCAGCTACGCGCAGATCGCGCAGCGCCTGGGGGTGTCCAGCAGCTCGGTCAAGCAATACCTCACGCGCGCCAAC
CGGCAATGCCTGTTCGCGCTGTCGGCCTGA

Protein sequence :

MSATQVALQQQVERLYTDHHGWLQGWLRRKLGDGCVAADLAQDTFISVIDAGAADQIREPRPFLATIARRLMAHRQRRKL
LEASYLEMLAALPEELAPSPELHLLALEAVQQLDQALDGLPPKVKEAFLLAHLHELSYAQIAQRLGVSSSSVKQYLTRAN
RQCLFALSA

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
unnamed	AAL08458.1	FecI	Virulence	SRL	Protein	3e-29	54

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
XCR_3964	YP_005638941.1	RNA polymerase sigma factor	VFG1049	Protein	1e-29	54