Gene Information

Name : SiH_1106 (SiH_1106)
Accession : YP_005645669.1
Strain : Sulfolobus islandicus HVE10/4
Genome accession: NC_017275
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1113215 - 1113898 bp
Length : 684 bp
Strand : -
Note : -

DNA sequence : 
ATGTATATGCCCGTAATAAGACTTGAAAATGTTACCAAGATTTATGAGGGGAATGTAAAGACTGTTGCGCTTAGAGATAT
AAACCTAAGTATTGATGAAGGAGAGTTTATTTCAATATTGGGACCTTCTGGCAGTGGAAAATCAACTCTCTTATCAATCT
TAGGAATTTTGGATAGACCATCACAAGGGAAGGTATATATTTATGAAATGGACGTAACTAAGCTAAGCGATGACGAAATC
TCAAAAATCAGAAATGAGTATATAGGCTTTGTATTTCAGAATTTTAATCTAATTCAGAGGCTTAGTGTACTACAAAACGT
TGAATTACCACTAGTAGCCAGAGGAATACCAAAAAAGAAAAGGGAGGAGATAGCAATAAATTCTCTAAAACTAGTGGAAT
TAGACGGAGTAATAAACAAAAGACCGTCAGAACTTTCTGGGGGACAACAGCAAAGAGTAGCTATAGCTCGTGCATTAGCC
CAAAATCCAAAGATCATATTAGCTGATGAACCTACTGGAAATTTAGATAGTATCAATGTAAAAATTGTAATGGACATATT
CAAAAAGATTAATGAGGAGTTTAAAACTACGATAGCAGTAGTAACACATGATAGAGAAGTTGCGAGTTATACAAGGAGAA
AGATCTACATCAGAGATGGAAAGATAGTTGGTGAAGAAAGATGA

Protein sequence : 
MYMPVIRLENVTKIYEGNVKTVALRDINLSIDEGEFISILGPSGSGKSTLLSILGILDRPSQGKVYIYEMDVTKLSDDEI
SKIRNEYIGFVFQNFNLIQRLSVLQNVELPLVARGIPKKKREEIAINSLKLVELDGVINKRPSELSGGQQQRVAIARALA
QNPKIILADEPTGNLDSINVKIVMDIFKKINEEFKTTIAVVTHDREVASYTRRKIYIRDGKIVGEER

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-29 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SiH_1106 YP_005645669.1 ABC transporter NC_012469.1.7686878. Protein 6e-47 49
SiH_1106 YP_005645669.1 ABC transporter NC_008702.1.4606598. Protein 8e-38 45
SiH_1106 YP_005645669.1 ABC transporter CP001581.1.gene798.p Protein 8e-35 44
SiH_1106 YP_005645669.1 ABC transporter CP001581.1.gene598.p Protein 2e-36 42
SiH_1106 YP_005645669.1 ABC transporter NC_012469.1.7686946. Protein 7e-23 41